Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P19270_001 | Banana | cytosol | 40.8 | 79.72 |
| GSMUA_Achr11P... | Banana | nucleus | 73.35 | 76.23 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 74.53 | 75.24 |
| CDY31481 | Canola | nucleus | 35.85 | 70.05 |
| PGSC0003DMT400075380 | Potato | nucleus | 38.92 | 69.62 |
| Os06t0726800-01 | Rice | nucleus | 61.32 | 62.05 |
| KXG20945 | Sorghum | nucleus | 61.08 | 61.08 |
| Zm00001d036360_P002 | Maize | nucleus | 59.2 | 59.2 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 58.49 | 59.19 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 58.49 | 59.19 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 61.32 | 58.96 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 58.25 | 58.95 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 58.02 | 58.57 |
| Os04t0563700-01 | Rice | mitochondrion | 57.55 | 58.1 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 54.95 | 57.53 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 57.31 | 57.31 |
| Solyc04g082430.2.1 | Tomato | nucleus | 53.07 | 57.25 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 37.5 | 57.19 |
| KRH76553 | Soybean | nucleus | 58.25 | 57.18 |
| KRH28901 | Soybean | nucleus | 57.78 | 56.58 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 54.48 | 56.48 |
| PGSC0003DMT400048062 | Potato | nucleus | 57.31 | 56.38 |
| Solyc03g032190.2.1 | Tomato | nucleus | 57.08 | 56.15 |
| CDX96631 | Canola | nucleus | 54.01 | 55.85 |
| Bra016460.1-P | Field mustard | nucleus | 54.01 | 55.85 |
| Bra025831.1-P | Field mustard | nucleus | 54.01 | 55.85 |
| CDY33634 | Canola | nucleus | 53.54 | 55.64 |
| CDX85942 | Canola | nucleus | 53.54 | 55.64 |
| Bra003727.1-P | Field mustard | nucleus | 50.24 | 55.61 |
| KRH60628 | Soybean | nucleus | 52.83 | 55.31 |
| KRH51329 | Soybean | nucleus, plastid | 53.77 | 54.94 |
| CDY29520 | Canola | nucleus | 53.07 | 54.88 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 54.48 | 54.87 |
| AT1G20610.1 | Thale cress | nucleus | 55.42 | 54.78 |
| PGSC0003DMT400003868 | Potato | nucleus | 55.9 | 54.73 |
| Solyc02g082820.2.1 | Tomato | nucleus | 55.66 | 54.38 |
| CDX68105 | Canola | nucleus | 50.24 | 53.92 |
| Zm00001d026129_P001 | Maize | nucleus | 54.01 | 53.76 |
| CDX88261 | Canola | nucleus | 54.48 | 53.72 |
| Bra015762.1-P | Field mustard | nucleus | 54.48 | 53.6 |
| EES12664 | Sorghum | nucleus | 54.48 | 53.47 |
| CDX87612 | Canola | nucleus | 54.25 | 53.36 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 33.25 | 53.21 |
| Solyc12g094600.1.1 | Tomato | nucleus | 53.07 | 52.94 |
| PGSC0003DMT400025854 | Potato | nucleus | 54.95 | 52.83 |
| PGSC0003DMT400093973 | Potato | nucleus | 40.8 | 52.42 |
| CDX72551 | Canola | nucleus | 49.29 | 52.12 |
| AT1G76310.3 | Thale cress | nucleus | 55.9 | 51.63 |
| Zm00001d002662_P010 | Maize | nucleus | 54.95 | 51.21 |
| AT4G35620.1 | Thale cress | nucleus | 51.65 | 51.05 |
| Bra017726.1-P | Field mustard | nucleus | 48.82 | 50.99 |
| CDY67210 | Canola | nucleus | 48.82 | 50.99 |
| CDY29184 | Canola | nucleus | 50.24 | 50.84 |
| Bra024504.1-P | Field mustard | nucleus | 50.24 | 50.84 |
| CDY07838 | Canola | nucleus | 49.76 | 50.48 |
| Solyc02g061650.1.1 | Tomato | nucleus | 41.75 | 50.43 |
| CDY30357 | Canola | nucleus | 48.11 | 49.88 |
| Bra037265.1-P | Field mustard | nucleus | 47.88 | 49.63 |
| CDY26816 | Canola | nucleus | 47.41 | 49.39 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 54.72 | 49.26 |
| AT2G17620.1 | Thale cress | nucleus | 49.76 | 49.18 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 70.75 | 44.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.77 | 40.94 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 39.39 | 39.29 |
| GSMUA_Achr10P... | Banana | nucleus | 40.09 | 37.53 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 38.21 | 37.24 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 39.86 | 36.98 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 34.2 | 36.07 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 18.4 | 31.58 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 21.23 | 31.47 |
| GSMUA_Achr10P... | Banana | nucleus | 23.35 | 31.23 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 25.0 | 27.11 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 22.17 | 26.11 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 27.83 | 23.6 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 26.89 | 22.71 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 25.94 | 20.3 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr5G19110_001 | EnsemblPlants:GSMUA_Achr5P19110_001 |
| EnsemblPlants:GSMUA_Achr5T19110_001 | UniProt:M0SZU0 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002959202 |
Description
Cyclin-B2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19110_001]
Coordinates
chr5:-:20605544..20607779
Molecular Weight (calculated)
48210.2 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.102
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGFEISAED DSIPPSPFAV TDMGDRRALK DIRNLVGAPP YPCAINKRGL TEKSNLDDKN PSFVARRPVT RKFAATLASK PQAYRQSQHE MLPPSVSSST
101: ALDSSIAIDV DNCSLSDDIE LPTVEEMEEM VCPKLLSEVE MEDIVAETVP DIDSCDSNNT LAVVEYVEEI YNFYRQTEVT GCASPQYMSH QFDINEKMRA
201: ILIDWLIEVH YKFELMEETL FLTVNIIDRF LARQTVVRKK LQLVGVTAML LACKYEEVSV PVVEDLVLIS DRAYTRDEIL DMERLILNTL QFNMSVPTPY
301: VFMRRFLKAA DSDRKLELLS FFIIELCLVE YKMLKFRPSL LAAAAIYTAQ CSLRGFKYWT KTSEMHTAYS EEQLLECTQL MVDFHQKAGL GKLTGVHRKY
401: STFKYGHTAK SAPALFLMNT GLQC
101: ALDSSIAIDV DNCSLSDDIE LPTVEEMEEM VCPKLLSEVE MEDIVAETVP DIDSCDSNNT LAVVEYVEEI YNFYRQTEVT GCASPQYMSH QFDINEKMRA
201: ILIDWLIEVH YKFELMEETL FLTVNIIDRF LARQTVVRKK LQLVGVTAML LACKYEEVSV PVVEDLVLIS DRAYTRDEIL DMERLILNTL QFNMSVPTPY
301: VFMRRFLKAA DSDRKLELLS FFIIELCLVE YKMLKFRPSL LAAAAIYTAQ CSLRGFKYWT KTSEMHTAYS EEQLLECTQL MVDFHQKAGL GKLTGVHRKY
401: STFKYGHTAK SAPALFLMNT GLQC
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.