Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31481 | Canola | nucleus | 60.0 | 73.27 |
| PGSC0003DMT400075380 | Potato | nucleus | 47.92 | 53.59 |
| AT1G20610.1 | Thale cress | nucleus | 71.32 | 44.06 |
| CDX96631 | Canola | nucleus | 66.42 | 42.93 |
| Bra025831.1-P | Field mustard | nucleus | 66.42 | 42.93 |
| CDY29520 | Canola | nucleus | 66.42 | 42.93 |
| Bra016460.1-P | Field mustard | nucleus | 66.04 | 42.68 |
| CDY33634 | Canola | nucleus | 65.66 | 42.65 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 43.02 | 41.01 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 31.32 | 38.25 |
| AT1G76310.3 | Thale cress | nucleus | 62.64 | 36.17 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 56.98 | 34.24 |
| GSMUA_Achr11P... | Banana | nucleus | 52.45 | 34.07 |
| Solyc04g082430.2.1 | Tomato | nucleus | 50.19 | 33.84 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 52.83 | 33.33 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 53.21 | 33.25 |
| Solyc12g094600.1.1 | Tomato | nucleus | 52.83 | 32.94 |
| KRH60628 | Soybean | nucleus | 50.19 | 32.84 |
| KRH51329 | Soybean | nucleus, plastid | 50.94 | 32.53 |
| Os06t0726800-01 | Rice | nucleus | 51.32 | 32.46 |
| KXG20945 | Sorghum | nucleus | 51.32 | 32.08 |
| AT4G35620.1 | Thale cress | nucleus | 51.32 | 31.7 |
| Zm00001d036360_P002 | Maize | nucleus | 50.57 | 31.6 |
| Os04t0563700-01 | Rice | mitochondrion | 49.81 | 31.43 |
| PGSC0003DMT400025854 | Potato | nucleus | 51.7 | 31.07 |
| AT2G17620.1 | Thale cress | nucleus | 49.81 | 30.77 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 46.79 | 30.62 |
| EES12664 | Sorghum | nucleus | 49.43 | 30.32 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 47.92 | 30.31 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 47.92 | 30.31 |
| Zm00001d026129_P001 | Maize | nucleus | 48.68 | 30.28 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 46.79 | 29.59 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 45.66 | 29.58 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 46.79 | 29.45 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 46.42 | 29.29 |
| Zm00001d002662_P010 | Maize | nucleus | 49.06 | 28.57 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 47.17 | 26.54 |
| AT3G11520.1 | Thale cress | nucleus | 36.6 | 23.43 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 52.45 | 20.81 |
| AT1G47220.1 | Thale cress | nucleus | 24.91 | 20.18 |
| AT2G26760.1 | Thale cress | nucleus | 29.43 | 20.16 |
| AT5G06150.1 | Thale cress | nucleus | 32.08 | 19.1 |
| AT1G47210.2 | Thale cress | nucleus | 26.79 | 19.09 |
| AT4G37490.1 | Thale cress | nucleus | 30.57 | 18.93 |
| AT5G43080.1 | Thale cress | nucleus | 25.28 | 18.87 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 25.66 | 18.38 |
| AT5G11300.1 | Thale cress | plastid | 30.19 | 18.35 |
| AT1G77390.1 | Thale cress | plastid | 27.92 | 16.74 |
| AT5G25380.4 | Thale cress | plastid | 27.92 | 16.7 |
| AT1G44110.1 | Thale cress | plastid | 27.92 | 16.09 |
| AT1G16330.1 | Thale cress | nucleus | 38.11 | 15.59 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 25.66 | 15.11 |
| AT1G80370.1 | Thale cress | plastid | 25.66 | 14.75 |
| AT1G34460.5 | Thale cress | cytosol | 18.11 | 9.64 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:35.1 | EntrezGene:838648 | ProteinID:AAF79604.1 | ProteinID:AAF80639.1 | ProteinID:AEE29991.2 |
| ArrayExpress:AT1G20590 | EnsemblPlantsGene:AT1G20590 | RefSeq:AT1G20590 | TAIR:AT1G20590 | RefSeq:AT1G20590-TAIR-G | EnsemblPlants:AT1G20590.1 |
| TAIR:AT1G20590.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051301 | RefSeq:NP_001319051.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | UniProt:Q9LM91 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI00000A1F91 | SEG:seg | : | : | : |
Description
CYCB2-5Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91]
Coordinates
chr1:-:7131166..7132465
Molecular Weight (calculated)
30802.9 Da
IEP (calculated)
9.964
GRAVY (calculated)
-0.130
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYSNNYIEH QNKKKTIIIF FRQFKKQKPM LRMGVHLVVI NKNTFNFFNR QNNYFNSGKT KKIFVIDRFL AVHQIVRKKL QLVGVTALLL ACKYEEVSVP
101: VVDDLILISD KAYSRREVLD MEKLMANTLQ FNFSLPTPYV FMKRFLKAAQ SDKKLEILSF FMIELCLVEY EMLEYLPSKL AASAIYTAQC TLKGFEEWSK
201: TCEFHTGYNE EQLLACARKM VAFHHKAGTG KLTGSTTHLS SFMLQEVNQL GFCFKGGKNY NKNLI
101: VVDDLILISD KAYSRREVLD MEKLMANTLQ FNFSLPTPYV FMKRFLKAAQ SDKKLEILSF FMIELCLVEY EMLEYLPSKL AASAIYTAQC TLKGFEEWSK
201: TCEFHTGYNE EQLLACARKM VAFHHKAGTG KLTGSTTHLS SFMLQEVNQL GFCFKGGKNY NKNLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.