Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016460.1-P | Field mustard | nucleus | 98.05 | 98.05 |
| CDY33634 | Canola | nucleus | 96.1 | 96.57 |
| CDY31481 | Canola | nucleus | 47.56 | 89.86 |
| CDY29520 | Canola | nucleus | 81.46 | 81.46 |
| AT1G20610.1 | Thale cress | nucleus | 83.9 | 80.19 |
| CDX85942 | Canola | nucleus | 71.71 | 72.06 |
| CDX87612 | Canola | nucleus | 75.12 | 71.46 |
| CDX88261 | Canola | nucleus | 74.88 | 71.4 |
| CDX68105 | Canola | nucleus | 68.78 | 71.39 |
| PGSC0003DMT400075380 | Potato | nucleus | 40.24 | 69.62 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 42.93 | 66.42 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 66.59 | 61.9 |
| Solyc04g082430.2.1 | Tomato | nucleus | 59.02 | 61.58 |
| PGSC0003DMT400025854 | Potato | nucleus | 63.9 | 59.41 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 31.22 | 58.99 |
| KRH60628 | Soybean | nucleus | 55.85 | 56.54 |
| Solyc12g094600.1.1 | Tomato | nucleus | 58.54 | 56.47 |
| Os06t0726800-01 | Rice | nucleus | 57.56 | 56.32 |
| Zm00001d036360_P002 | Maize | nucleus | 57.8 | 55.9 |
| KRH51329 | Soybean | nucleus, plastid | 56.34 | 55.66 |
| KXG20945 | Sorghum | nucleus | 57.56 | 55.66 |
| GSMUA_Achr11P... | Banana | nucleus | 54.88 | 55.15 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 55.85 | 54.01 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 55.12 | 53.94 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 55.12 | 53.94 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 54.88 | 53.7 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 54.88 | 53.57 |
| CDX72551 | Canola | nucleus | 52.2 | 53.37 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 54.63 | 53.33 |
| CDY26816 | Canola | nucleus | 52.44 | 52.83 |
| CDY30357 | Canola | nucleus | 52.44 | 52.57 |
| CDY29184 | Canola | nucleus | 53.41 | 52.27 |
| CDY67210 | Canola | nucleus | 51.71 | 52.22 |
| CDY07838 | Canola | nucleus | 52.93 | 51.91 |
| Os04t0563700-01 | Rice | mitochondrion | 52.2 | 50.95 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 49.76 | 50.37 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 49.51 | 49.63 |
| Zm00001d026129_P001 | Maize | nucleus | 51.46 | 49.53 |
| EES12664 | Sorghum | nucleus | 51.71 | 49.07 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 32.93 | 48.56 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 49.51 | 48.22 |
| Zm00001d002662_P010 | Maize | nucleus | 51.71 | 46.59 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 50.0 | 43.52 |
| CDY62475 | Canola | nucleus | 31.71 | 37.04 |
| CDY69551 | Canola | nucleus | 31.71 | 36.62 |
| CDX80988 | Canola | plastid | 35.85 | 34.35 |
| CDY11354 | Canola | plastid | 36.1 | 34.18 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 55.61 | 34.13 |
| CDY06752 | Canola | nucleus | 23.66 | 34.04 |
| CDY06757 | Canola | nucleus, plastid | 27.8 | 31.41 |
| CDX69311 | Canola | nucleus | 31.71 | 31.03 |
| CDY66770 | Canola | nucleus | 27.32 | 30.94 |
| CDY17039 | Canola | nucleus | 27.32 | 30.85 |
| CDY47596 | Canola | nucleus | 27.32 | 30.85 |
| CDX75659 | Canola | nucleus | 31.95 | 30.61 |
| CDY23653 | Canola | nucleus | 26.59 | 30.53 |
| CDY61993 | Canola | nucleus | 28.05 | 30.5 |
| CDY48212 | Canola | nucleus | 27.56 | 29.97 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 15.37 | 29.86 |
| CDY22369 | Canola | nucleus | 25.37 | 29.63 |
| CDY17091 | Canola | nucleus | 25.85 | 29.61 |
| CDX88368 | Canola | plastid | 27.32 | 29.47 |
| CDX85466 | Canola | plastid | 30.24 | 29.38 |
| CDX87520 | Canola | nucleus | 27.56 | 29.27 |
| CDY41784 | Canola | plastid | 23.9 | 28.82 |
| CDX81722 | Canola | nucleus, plastid | 28.29 | 28.78 |
| CDY17037 | Canola | nucleus, plastid | 25.37 | 28.57 |
| CDY02719 | Canola | plastid | 29.76 | 28.44 |
| CDY53304 | Canola | plastid | 28.05 | 28.12 |
| CDY47595 | Canola | nucleus, plastid | 25.37 | 28.03 |
| CDY65994 | Canola | plastid | 30.24 | 27.99 |
| CDX97090 | Canola | nucleus | 29.51 | 27.75 |
| CDX87087 | Canola | plastid | 27.8 | 27.34 |
| CDY25649 | Canola | plastid | 29.02 | 27.23 |
| CDX69768 | Canola | nucleus, plastid | 29.02 | 27.23 |
| CDX92090 | Canola | mitochondrion, nucleus | 23.41 | 26.89 |
| CDX67944 | Canola | plastid | 28.29 | 26.85 |
| CDX96836 | Canola | nucleus, plastid | 28.78 | 26.82 |
| CDX79389 | Canola | plastid | 28.29 | 26.79 |
| CDY66415 | Canola | nucleus | 28.29 | 26.73 |
| CDY36574 | Canola | mitochondrion, nucleus | 28.05 | 26.38 |
| CDY37592 | Canola | mitochondrion, plastid | 29.27 | 26.26 |
| CDY38664 | Canola | nucleus, plastid | 29.02 | 26.15 |
| CDY39984 | Canola | plastid | 28.05 | 25.67 |
| CDX87305 | Canola | plastid | 28.54 | 25.32 |
| CDY33338 | Canola | nucleus | 34.63 | 24.32 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 35.61 | 23.97 |
| CDY14091 | Canola | plastid | 36.1 | 22.56 |
| CDX96819 | Canola | nucleus | 35.12 | 22.33 |
| CDX83953 | Canola | nucleus | 34.88 | 21.83 |
| CDY04980 | Canola | nucleus | 36.1 | 20.61 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 27.56 | 11.43 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078E5U7 | EnsemblPlants:CDX96631 | ProteinID:CDX96631 | ProteinID:CDX96631.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00102834001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE87B8 | SEG:seg | : | : | : | : |
Description
BnaA08g21740D
Coordinates
chrLK031895:+:334469..336753
Molecular Weight (calculated)
46690.1 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.367
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKSDENSVG LIGLTNLQGG GGKIMPAAKP GPTRRALSAI NKNINEPPSY PYAVNNKRSL SERNAICNKP PPHRPVTRKF AAQLAGDKPQ IKEEETKKPE
101: SVPSEEAVDF NEPMFVQHTQ AMMEEIEMED ADEDKEEEEG VINIDACDEM NPLAVVEYIN DIYDFFKKSE ELSCVPPNYM DNQQDLNERM RGILIDWLIE
201: VHYKFELMEE TLYLTVSVID RFLAVHQIVR KKLQLVGVTA LLLACKYEEV SVPVVDDLIL ISDKAYNRRE VLDMEKLMAN TLQFNFSLPT PYVFMRRFLK
301: AAQSDKKLEV LSFFIIELCL VEYEMLEYTP SKLAASAIYT ARCTLNGFEE WSKTCEFHTG YKEEELLECA RKMVGFHQKA GTGKLTGVHR KYNTSKFSYA
401: ARTEPAGFLL
101: SVPSEEAVDF NEPMFVQHTQ AMMEEIEMED ADEDKEEEEG VINIDACDEM NPLAVVEYIN DIYDFFKKSE ELSCVPPNYM DNQQDLNERM RGILIDWLIE
201: VHYKFELMEE TLYLTVSVID RFLAVHQIVR KKLQLVGVTA LLLACKYEEV SVPVVDDLIL ISDKAYNRRE VLDMEKLMAN TLQFNFSLPT PYVFMRRFLK
301: AAQSDKKLEV LSFFIIELCL VEYEMLEYTP SKLAASAIYT ARCTLNGFEE WSKTCEFHTG YKEEELLECA RKMVGFHQKA GTGKLTGVHR KYNTSKFSYA
401: ARTEPAGFLL
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Arabidopsis Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.