Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008835.1-P | Field mustard | nucleus | 98.62 | 98.62 |
| CDY09787 | Canola | nucleus | 97.7 | 95.07 |
| AT5G13330.1 | Thale cress | nucleus | 76.04 | 77.83 |
| CDX85656 | Canola | nucleus | 83.87 | 73.09 |
| CDX70498 | Canola | nucleus | 85.25 | 71.71 |
| CDX91131 | Canola | nucleus | 83.87 | 71.65 |
| CDX78517 | Canola | nucleus | 83.87 | 70.54 |
| KRH01504 | Soybean | nucleus | 43.32 | 38.84 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 41.47 | 37.97 |
| CDY37698 | Canola | mitochondrion | 29.49 | 37.87 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 29.49 | 36.16 |
| KRH45195 | Soybean | nucleus | 45.62 | 35.74 |
| GSMUA_Achr10P... | Banana | nucleus | 34.56 | 33.04 |
| CDY17191 | Canola | nucleus | 32.72 | 32.87 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 37.79 | 32.67 |
| CDY53788 | Canola | golgi | 29.49 | 32.65 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 37.79 | 32.41 |
| CDX70027 | Canola | nucleus | 37.79 | 32.41 |
| CDX98982 | Canola | nucleus | 37.79 | 32.41 |
| CDY53152 | Canola | nucleus | 33.64 | 32.3 |
| CDY27952 | Canola | nucleus | 31.8 | 31.94 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 36.87 | 31.62 |
| CDY14051 | Canola | nucleus | 36.87 | 31.25 |
| CDY55173 | Canola | nucleus | 35.94 | 30.59 |
| CDX78288 | Canola | nucleus | 35.94 | 30.59 |
| Os04t0398000-02 | Rice | nucleus | 36.87 | 29.85 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 35.94 | 28.06 |
| CDY27480 | Canola | nucleus | 24.42 | 27.46 |
| CDY51428 | Canola | nucleus | 24.42 | 27.04 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 35.02 | 26.12 |
| CDX72909 | Canola | nucleus | 22.12 | 25.53 |
| CDY28337 | Canola | nucleus | 25.35 | 22.63 |
| CDY34977 | Canola | nucleus | 24.88 | 22.41 |
| CDX72481 | Canola | nucleus | 26.27 | 22.09 |
| CDX92094 | Canola | nucleus | 24.42 | 21.9 |
| CDY46253 | Canola | nucleus | 26.27 | 21.84 |
| CDX68269 | Canola | nucleus | 22.12 | 21.72 |
| CDY54628 | Canola | nucleus | 24.42 | 21.63 |
| CDX82392 | Canola | nucleus | 24.42 | 21.63 |
| CDX76278 | Canola | nucleus | 26.27 | 21.51 |
| CDY45310 | Canola | nucleus | 25.81 | 21.46 |
| CDX95906 | Canola | nucleus | 23.96 | 21.31 |
| CDY50643 | Canola | nucleus | 22.12 | 21.15 |
| CDX75430 | Canola | nucleus | 25.35 | 20.99 |
| CDX69054 | Canola | nucleus | 25.35 | 20.83 |
| CDX69056 | Canola | nucleus | 18.43 | 19.61 |
| CDX96402 | Canola | nucleus | 22.58 | 19.6 |
| CDY31304 | Canola | nucleus | 30.41 | 17.32 |
| CDY14506 | Canola | nucleus | 30.88 | 17.09 |
| CDY46821 | Canola | nucleus | 29.95 | 17.02 |
| CDY08853 | Canola | nucleus | 30.88 | 16.96 |
| OQU81440 | Sorghum | nucleus | 37.79 | 16.53 |
| CDX81250 | Canola | nucleus | 29.49 | 15.88 |
| CDX75756 | Canola | nucleus | 24.42 | 15.23 |
| CDX82492 | Canola | nucleus | 23.96 | 14.77 |
| CDY02492 | Canola | nucleus | 19.82 | 14.05 |
| CDY25681 | Canola | nucleus | 19.35 | 13.68 |
| CDY65334 | Canola | nucleus | 23.5 | 13.32 |
| CDX98435 | Canola | nucleus | 23.04 | 13.19 |
| CDY39107 | Canola | nucleus | 23.5 | 13.08 |
| CDX97559 | Canola | nucleus | 23.5 | 11.94 |
| CDY71587 | Canola | cytosol | 2.3 | 7.25 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078BZ45 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX69647 |
| ProteinID:CDX69647 | ProteinID:CDX69647.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00135667001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF58 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EED746 | SEG:seg | : | : | : | : |
Description
BnaA10g19960D
Coordinates
chrLK031790:-:1158577..1161626
Molecular Weight (calculated)
24805.4 Da
IEP (calculated)
7.872
GRAVY (calculated)
-1.122
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSLSRAIE YPAADGQERS DSPVKQELSK SDQLQQDQDQ PRRKHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFETAEE AAFAYDRAAL KFKGTKAKLN
101: FPEHLQGPST TTYVSSQSGI DHVPRGGSEL MNSPPPPPTT WPTNYNQDIL QYAQLLTSNN DVDLSYYTSS LLSQQQQPFS THSSSSSSLS SQQQQQLHQQ
201: REEEKNYGYH YYNYPRE
101: FPEHLQGPST TTYVSSQSGI DHVPRGGSEL MNSPPPPPTT WPTNYNQDIL QYAQLLTSNN DVDLSYYTSS LLSQQQQPFS THSSSSSSLS SQQQQQLHQQ
201: REEEKNYGYH YYNYPRE
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.