Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69054 | Canola | nucleus | 84.31 | 65.15 |
| CDX75430 | Canola | nucleus | 78.43 | 61.07 |
| CDX72481 | Canola | nucleus | 70.59 | 55.81 |
| CDY45310 | Canola | nucleus | 70.59 | 55.17 |
| CDY46253 | Canola | nucleus | 69.12 | 54.02 |
| AT4G34410.1 | Thale cress | nucleus | 70.59 | 53.73 |
| CDX76278 | Canola | nucleus | 69.61 | 53.58 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 25.98 | 34.42 |
| PGSC0003DMT400021311 | Potato | nucleus | 24.51 | 32.26 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 20.59 | 30.22 |
| KRH50274 | Soybean | nucleus | 33.82 | 30.0 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 36.27 | 29.96 |
| KRH71142 | Soybean | nucleus | 29.9 | 28.37 |
| Solyc10g050970.1.1 | Tomato | nucleus | 30.39 | 27.8 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 25.98 | 26.77 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 29.9 | 25.96 |
| PGSC0003DMT400066343 | Potato | nucleus | 37.25 | 25.76 |
| Solyc01g108240.2.1 | Tomato | nucleus | 36.76 | 25.42 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 30.88 | 25.1 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 32.84 | 25.09 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 31.37 | 24.71 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 30.88 | 24.61 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 31.86 | 24.53 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 31.86 | 24.53 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 28.92 | 24.38 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 31.86 | 24.34 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 28.43 | 24.07 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 30.39 | 23.85 |
| Zm00001d031796_P001 | Maize | nucleus | 30.88 | 23.42 |
| Os08t0474000-01 | Rice | nucleus | 25.0 | 23.29 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 27.94 | 23.17 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 29.9 | 23.11 |
| CDY37698 | Canola | mitochondrion | 19.12 | 23.08 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 29.41 | 22.56 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 28.92 | 21.77 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 28.43 | 21.64 |
| OQU80635 | Sorghum | nucleus | 30.88 | 21.58 |
| CDY17191 | Canola | nucleus | 22.06 | 20.83 |
| Zm00001d005892_P001 | Maize | nucleus | 26.47 | 20.53 |
| Os09t0457900-01 | Rice | nucleus | 27.45 | 20.44 |
| EER96855 | Sorghum | mitochondrion, nucleus | 29.41 | 20.41 |
| CDY27952 | Canola | nucleus | 21.57 | 20.37 |
| CDY53788 | Canola | golgi | 19.12 | 19.9 |
| CDY27480 | Canola | nucleus | 18.63 | 19.69 |
| CDY51428 | Canola | nucleus | 18.14 | 18.88 |
| CDX72909 | Canola | nucleus | 17.16 | 18.62 |
| CDY53152 | Canola | nucleus | 20.59 | 18.58 |
| CDX69647 | Canola | nucleus | 19.61 | 18.43 |
| CDY09787 | Canola | nucleus | 20.1 | 18.39 |
| CDX95906 | Canola | nucleus | 20.59 | 17.21 |
| CDX78517 | Canola | nucleus | 21.57 | 17.05 |
| CDY34977 | Canola | nucleus | 20.1 | 17.01 |
| CDX92094 | Canola | nucleus | 20.1 | 16.94 |
| CDX70498 | Canola | nucleus | 21.08 | 16.67 |
| CDX78288 | Canola | nucleus | 20.59 | 16.47 |
| CDX85656 | Canola | nucleus | 20.1 | 16.47 |
| CDY28337 | Canola | nucleus | 19.61 | 16.46 |
| CDY14051 | Canola | nucleus | 20.59 | 16.41 |
| CDX68269 | Canola | nucleus | 17.65 | 16.29 |
| CDX70027 | Canola | nucleus | 20.1 | 16.21 |
| CDX98982 | Canola | nucleus | 20.1 | 16.21 |
| CDX91131 | Canola | nucleus | 20.1 | 16.14 |
| CDY55173 | Canola | nucleus | 20.1 | 16.08 |
| CDY50643 | Canola | nucleus | 17.65 | 15.86 |
| CDX82392 | Canola | nucleus | 18.14 | 15.1 |
| CDY54628 | Canola | nucleus | 18.14 | 15.1 |
| CDY31304 | Canola | nucleus | 26.47 | 14.17 |
| CDY46821 | Canola | nucleus | 25.98 | 13.87 |
| CDX96402 | Canola | nucleus | 16.18 | 13.2 |
| CDY14506 | Canola | nucleus | 24.51 | 12.76 |
| CDY08853 | Canola | nucleus | 24.51 | 12.66 |
| CDX81250 | Canola | nucleus | 25.0 | 12.66 |
| CDY71587 | Canola | cytosol | 3.92 | 11.59 |
| CDX75756 | Canola | nucleus | 17.16 | 10.06 |
| CDX82492 | Canola | nucleus | 17.16 | 9.94 |
| CDX98435 | Canola | nucleus | 17.16 | 9.23 |
| CDY39107 | Canola | nucleus | 17.65 | 9.23 |
| CDY02492 | Canola | nucleus | 13.73 | 9.15 |
| CDY65334 | Canola | nucleus | 16.67 | 8.88 |
| CDY25681 | Canola | nucleus | 12.75 | 8.47 |
| CDX97559 | Canola | nucleus | 17.65 | 8.43 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078BW81 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX69056 |
| ProteinID:CDX69056 | ProteinID:CDX69056.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00130824001 | InterPro:IPR001471 | InterPro:IPR036955 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE362E | SEG:seg |
Description
BnaC01g03970D
Coordinates
chrLK031789:+:2692486..2693317
Molecular Weight (calculated)
21898.1 Da
IEP (calculated)
4.424
GRAVY (calculated)
-0.506
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYPNNRPKL SGVPSSPDRD LTRYSYHNQE QLSPEQELSV IVSALQHVIS GENETAPYQG FSSTVISAGM PRSGFRRLPD VQDPRLSQER ATCVWLGTFE
101: TAEDAARAYD RAAIGFRGPR AKLNFPFADY TSSASSPVGA EDVGTSASAS ANVSASTSVS AADSHGGGGG WDCDMDEYLK MMMMMDFGNG DSSDSGNTIA
201: DMFQ
101: TAEDAARAYD RAAIGFRGPR AKLNFPFADY TSSASSPVGA EDVGTSASAS ANVSASTSVS AADSHGGGGG WDCDMDEYLK MMMMMDFGNG DSSDSGNTIA
201: DMFQ
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.