Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18930_001 | Banana | nucleus | 29.36 | 49.64 |
| PGSC0003DMT400021311 | Potato | nucleus | 30.64 | 46.45 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 36.17 | 42.93 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 43.83 | 42.74 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 42.98 | 41.74 |
| Zm00001d031796_P001 | Maize | nucleus | 47.66 | 41.64 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 43.4 | 41.46 |
| Os09t0457900-01 | Rice | nucleus | 47.23 | 40.51 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 25.53 | 38.96 |
| Bra034624.1-P | Field mustard | nucleus | 27.23 | 37.87 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 42.98 | 37.69 |
| OQU80635 | Sorghum | nucleus | 46.81 | 37.67 |
| Os08t0474000-01 | Rice | nucleus | 34.89 | 37.44 |
| Solyc10g050970.1.1 | Tomato | nucleus | 35.32 | 37.22 |
| KRH50274 | Soybean | nucleus | 36.17 | 36.96 |
| CDY46253 | Canola | nucleus | 40.43 | 36.4 |
| CDX72481 | Canola | nucleus | 39.57 | 36.05 |
| CDY45310 | Canola | nucleus | 40.0 | 36.02 |
| CDX76278 | Canola | nucleus | 40.43 | 35.85 |
| KRH71142 | Soybean | nucleus | 32.77 | 35.81 |
| Bra011529.1-P | Field mustard | nucleus | 39.15 | 35.11 |
| CDX75430 | Canola | nucleus | 39.15 | 35.11 |
| AT4G34410.1 | Thale cress | nucleus | 40.0 | 35.07 |
| Bra017656.1-P | Field mustard | nucleus | 39.57 | 34.44 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 35.74 | 34.01 |
| CDX69054 | Canola | nucleus | 37.87 | 33.71 |
| CDX69056 | Canola | nucleus | 25.96 | 29.9 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 22.55 | 28.8 |
| Solyc01g108240.2.1 | Tomato | nucleus | 35.32 | 28.14 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 18.3 | 27.92 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 23.4 | 27.92 |
| PGSC0003DMT400066343 | Potato | nucleus | 34.47 | 27.46 |
| GSMUA_Achr11P... | Banana | nucleus | 22.13 | 26.13 |
| GSMUA_Achr10P... | Banana | nucleus | 25.11 | 25.99 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 25.53 | 25.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.98 | 25.0 |
| GSMUA_Achr11P... | Banana | nucleus | 26.81 | 24.61 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 27.23 | 24.15 |
| GSMUA_Achr10P... | Banana | nucleus | 30.21 | 24.15 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 22.98 | 23.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.98 | 23.08 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 22.98 | 22.78 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 23.83 | 22.76 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 27.23 | 21.99 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 22.98 | 21.77 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 25.53 | 21.58 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 23.4 | 20.07 |
| GSMUA_Achr10P... | Banana | nucleus | 22.13 | 19.33 |
| GSMUA_Achr10P... | Banana | nucleus | 22.13 | 18.12 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 24.68 | 17.79 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 22.55 | 16.06 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 24.26 | 15.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.4 | 14.71 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 23.4 | 14.32 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G06960_001 | EnsemblPlants:GSMUA_Achr3P06960_001 | EnsemblPlants:GSMUA_Achr3T06960_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SCG3 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002953564 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G06960_001]
Coordinates
chr3:-:4672636..4673343
Molecular Weight (calculated)
26025.9 Da
IEP (calculated)
10.684
GRAVY (calculated)
-0.640
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPKKKEAAF LLSAVKPPQT RNEQQQRGMS SSYDWQPSFP SSSRLSREQE TSVIVSALAH VVSGYATAPA QLPVAETCRM CGIDGCLGCE FFSFDEDEVA
101: VAASESRGSG GARKRRKKKK SKYRGVRQRP WGKWAAEIRD PRRAVRKWLG TFVTAEEAAR AYDRAALEFR GPRAKLNFPF TDPQPAAAAQ ASHRAGRLNA
201: SSTAGHPRVS PLQQEKPTVA ERGMQEMMKV WELIV
101: VAASESRGSG GARKRRKKKK SKYRGVRQRP WGKWAAEIRD PRRAVRKWLG TFVTAEEAAR AYDRAALEFR GPRAKLNFPF TDPQPAAAAQ ASHRAGRLNA
201: SSTAGHPRVS PLQQEKPTVA ERGMQEMMKV WELIV
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.