Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P18090_001 | Banana | nucleus | 38.02 | 58.87 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 40.36 | 56.57 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 33.85 | 56.52 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 21.35 | 53.25 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 45.05 | 53.07 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 31.77 | 51.48 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 47.4 | 50.14 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 22.4 | 46.74 |
| PGSC0003DMT400012547 | Potato | nucleus | 44.79 | 46.24 |
| GSMUA_Achr10P... | Banana | nucleus | 32.29 | 46.1 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 39.58 | 46.06 |
| GSMUA_Achr11P... | Banana | nucleus | 23.7 | 45.73 |
| Solyc06g063070.2.1 | Tomato | nucleus | 44.27 | 45.7 |
| KRH69017 | Soybean | nucleus | 40.1 | 44.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.0 | 44.44 |
| GSMUA_Achr10P... | Banana | nucleus | 32.81 | 43.9 |
| Solyc03g123500.2.1 | Tomato | nucleus | 42.97 | 42.75 |
| PGSC0003DMT400023609 | Potato | nucleus | 42.97 | 42.31 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 14.58 | 40.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.06 | 40.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.4 | 36.75 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 15.89 | 30.96 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 14.32 | 27.78 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 15.36 | 25.54 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 15.89 | 24.8 |
| GSMUA_Achr10P... | Banana | nucleus | 14.06 | 23.79 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 14.32 | 23.4 |
| GSMUA_Achr11P... | Banana | nucleus | 15.36 | 23.05 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 15.36 | 22.26 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 14.32 | 19.78 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 14.84 | 19.59 |
| GSMUA_Achr10P... | Banana | nucleus | 13.8 | 18.03 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G24060_001 | EnsemblPlants:GSMUA_Achr5P24060_001 |
| EnsemblPlants:GSMUA_Achr5T24060_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T181 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029627D4 |
| SEG:seg | : | : | : | : | : |
Description
Putative Ethylene-responsive transcription factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24060_001]
Coordinates
chr5:-:25556050..25559555
Molecular Weight (calculated)
43735.8 Da
IEP (calculated)
4.959
GRAVY (calculated)
-0.866
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDF VPAARSWRLV SEDVLWPDLK NGSKKKKKKK KKDGRRRAVE EAEDDFDALF QEFNEEYGRS KNDEEVELVD HKHCAFPPKG GPISSRPIES
101: DGPAARSPKR KRKNQYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDVEAR SIRGKKAKVN FPDEAPPSAQ KHLMKSTAWE APTWNPEDSL
201: NFNHNFNYVN DDNHDFFMTL DLFEEKEPIK HSKNMNSFTE IELAPPSEEP RTRNVNTFSD HGSPTFGYSE YAWEQEVKYP YITTIVDPAN PEAENFVLLE
301: DGCLTKKLKN NAGEAVPAKE IDDVKLSKEL SAFESFMKLL QTPYLEGSSD EAIDSFLDCD ATQGEDGVDL WSFDNLPPIA ETIY
101: DGPAARSPKR KRKNQYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDVEAR SIRGKKAKVN FPDEAPPSAQ KHLMKSTAWE APTWNPEDSL
201: NFNHNFNYVN DDNHDFFMTL DLFEEKEPIK HSKNMNSFTE IELAPPSEEP RTRNVNTFSD HGSPTFGYSE YAWEQEVKYP YITTIVDPAN PEAENFVLLE
301: DGCLTKKLKN NAGEAVPAKE IDDVKLSKEL SAFESFMKLL QTPYLEGSSD EAIDSFLDCD ATQGEDGVDL WSFDNLPPIA ETIY
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.