Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g123500.2.1 | Tomato | nucleus | 91.54 | 92.49 |
| PGSC0003DMT400012547 | Potato | nucleus | 64.62 | 67.74 |
| PGSC0003DMT400074248 | Potato | nucleus | 54.62 | 54.9 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 53.08 | 54.62 |
| KRH69017 | Soybean | nucleus | 45.9 | 51.88 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 35.38 | 50.37 |
| GSMUA_Achr10P... | Banana | nucleus | 30.26 | 43.87 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 42.31 | 42.97 |
| Os02t0782700-01 | Rice | nucleus | 38.46 | 41.1 |
| EER87998 | Sorghum | nucleus | 36.41 | 39.66 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 36.41 | 39.12 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 36.15 | 38.84 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 34.87 | 38.53 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 34.87 | 38.31 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 37.18 | 38.06 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 34.62 | 38.03 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 36.67 | 37.93 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 37.44 | 37.82 |
| PGSC0003DMT400081322 | Potato | nucleus | 26.92 | 37.77 |
| KXG35689 | Sorghum | nucleus, plastid | 37.69 | 37.69 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 35.64 | 37.67 |
| Os06t0194000-02 | Rice | nucleus | 34.87 | 37.57 |
| Zm00001d052087_P001 | Maize | nucleus | 34.62 | 37.4 |
| Os09t0434500-01 | Rice | vacuole | 37.95 | 37.37 |
| EES07642 | Sorghum | nucleus | 34.62 | 36.68 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 30.77 | 36.25 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 28.97 | 36.22 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 36.15 | 36.06 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 26.41 | 36.01 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 25.64 | 35.84 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 35.64 | 35.64 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 25.38 | 35.48 |
| KXG36690 | Sorghum | nucleus | 28.97 | 35.31 |
| TraesCSU01G183700.1 | Wheat | nucleus | 25.64 | 35.21 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 35.9 | 35.18 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 35.9 | 35.18 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 21.28 | 35.17 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 35.64 | 34.92 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 28.46 | 34.69 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 28.72 | 34.67 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 27.44 | 34.29 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 29.49 | 33.82 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 27.95 | 33.64 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 34.87 | 33.42 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 24.62 | 33.1 |
| Os07t0617000-02 | Rice | nucleus | 28.97 | 33.04 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 32.05 | 32.98 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 30.0 | 32.59 |
| PGSC0003DMT400043311 | Potato | nucleus | 22.05 | 32.58 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 30.51 | 32.51 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 31.03 | 32.35 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 31.79 | 32.21 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 29.74 | 32.04 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 31.03 | 31.59 |
| Zm00001d020595_P001 | Maize | nucleus | 33.59 | 31.34 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 12.31 | 31.17 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 31.03 | 31.11 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 28.72 | 30.77 |
| Zm00001d005798_P001 | Maize | nucleus | 32.05 | 29.55 |
| PGSC0003DMT400021311 | Potato | nucleus | 11.54 | 29.03 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 24.36 | 28.7 |
| PGSC0003DMT400011537 | Potato | mitochondrion, nucleus | 13.33 | 27.81 |
| Zm00001d018305_P001 | Maize | nucleus | 17.95 | 24.82 |
| PGSC0003DMT400010296 | Potato | nucleus | 12.82 | 24.63 |
| PGSC0003DMT400010297 | Potato | nucleus | 12.56 | 24.62 |
| EES13952 | Sorghum | nucleus | 23.33 | 24.53 |
| Zm00001d032095_P001 | Maize | nucleus | 23.85 | 24.47 |
| PGSC0003DMT400065732 | Potato | nucleus | 13.08 | 22.17 |
| Zm00001d047339_P001 | Maize | plastid | 25.13 | 21.73 |
| PGSC0003DMT400036934 | Potato | nucleus | 13.85 | 19.57 |
| PGSC0003DMT400060659 | Potato | nucleus | 16.41 | 18.88 |
| PGSC0003DMT400066343 | Potato | nucleus | 14.1 | 18.64 |
| PGSC0003DMT400050718 | Potato | nucleus | 16.92 | 16.67 |
| PGSC0003DMT400048407 | Potato | nucleus | 15.38 | 15.19 |
| Zm00001d045386_P002 | Maize | plastid | 14.87 | 14.22 |
| PGSC0003DMT400016306 | Potato | nucleus | 15.9 | 14.06 |
Protein Annotations
| EntrezGene:102591860 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1AIN5 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400009142 | PGSC:PGSC0003DMG400009142 | EnsemblPlants:PGSC0003DMT400023609 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029651F2 |
| RefSeq:XP_006342907.1 | RefSeq:XP_006342908.1 | SEG:seg | : | : | : |
Description
Callus-expressing factor [Source:PGSC_GENE;Acc:PGSC0003DMG400009142]
Coordinates
chr3:+:61580450..61583591
Molecular Weight (calculated)
43345.8 Da
IEP (calculated)
4.941
GRAVY (calculated)
-0.786
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGSIISDY IDPNRTSRRL TAELLWGRFD LSKKQKNPNN YHSKHLRSEV VDDFEADFQD FKELSDDEDV EVDVKPFAFS ASKQSTGSKS SKTVDSDKDA
101: ADKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDIEARKIR GKKAKVNFPD EAPAPASRHT VKVNPQKVLP EESLDSLQSD
201: SAIMNSDHYD SFGFFEEKPM TKQYGYENGS SASADTGFGS FVPSVGGDIY FNSDVGSNSF ECSDFGWGEP CSRTPEISSV LSAAVDSNEA QFVEDANPQK
301: KLKSCTNNPV ADDGNTVNML SEELPAFAPQ MNFFHLQYME GNWDASVGNF LNTSATQNGE NAMDLWSFDD VPSLMGGVSG GGRRMIHRET
101: ADKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDIEARKIR GKKAKVNFPD EAPAPASRHT VKVNPQKVLP EESLDSLQSD
201: SAIMNSDHYD SFGFFEEKPM TKQYGYENGS SASADTGFGS FVPSVGGDIY FNSDVGSNSF ECSDFGWGEP CSRTPEISSV LSAAVDSNEA QFVEDANPQK
301: KLKSCTNNPV ADDGNTVNML SEELPAFAPQ MNFFHLQYME GNWDASVGNF LNTSATQNGE NAMDLWSFDD VPSLMGGVSG GGRRMIHRET
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.