Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G021820.1 | Barley | nucleus | 52.19 | 58.39 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 66.88 | 57.99 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 58.44 | 57.72 |
| TraesCSU01G183700.1 | Wheat | nucleus | 50.94 | 57.39 |
| HORVU6Hr1G082770.1 | Barley | nucleus | 69.69 | 57.33 |
| HORVU6Hr1G083530.1 | Barley | nucleus | 70.94 | 57.32 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 62.19 | 54.37 |
| HORVU6Hr1G082820.1 | Barley | nucleus | 67.19 | 53.22 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 62.5 | 52.77 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 64.06 | 52.43 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 47.5 | 52.41 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 38.44 | 52.12 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 58.12 | 51.1 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 58.75 | 50.27 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 50.62 | 50.15 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 48.75 | 50.0 |
| EES07642 | Sorghum | nucleus | 55.0 | 47.83 |
| Zm00001d052087_P001 | Maize | nucleus | 53.75 | 47.65 |
| Zm00001d018305_P001 | Maize | nucleus | 32.81 | 37.23 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 45.0 | 36.92 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 39.38 | 33.25 |
| KRG97290 | Soybean | nucleus | 30.94 | 33.11 |
| KRH69017 | Soybean | nucleus | 32.81 | 30.43 |
| PGSC0003DMT400012547 | Potato | nucleus | 34.06 | 29.3 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 30.0 | 29.09 |
| Solyc03g123500.2.1 | Tomato | nucleus | 34.38 | 28.5 |
| Solyc06g063070.2.1 | Tomato | nucleus | 33.12 | 28.49 |
| PGSC0003DMT400023609 | Potato | nucleus | 34.69 | 28.46 |
| KRH06265 | Soybean | nucleus | 33.44 | 28.01 |
| KRH47694 | Soybean | nucleus | 34.06 | 27.81 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 15.31 | 27.68 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 15.62 | 26.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.25 | 26.74 |
| PGSC0003DMT400074248 | Potato | nucleus | 30.94 | 25.52 |
| Solyc12g049560.1.1 | Tomato | nucleus | 30.62 | 25.39 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 29.69 | 23.34 |
| HORVU6Hr1G078520.1 | Barley | nucleus | 13.44 | 22.99 |
| HORVU4Hr1G077310.2 | Barley | nucleus | 22.19 | 20.76 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 18.75 | 20.07 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 16.25 | 19.7 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 15.94 | 19.03 |
| HORVU6Hr1G078510.5 | Barley | nucleus | 14.38 | 17.9 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 15.62 | 15.92 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU6Hr1G076090 | EnsemblPlants:HORVU6Hr1G076090.2 | InterPro:IPR001471 |
| InterPro:IPR036955 | UniProt:M0UDG0 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296AAB5 | SEG:seg | : |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0UDG0]
Coordinates
chrchr6H:-:523978686..523983852
Molecular Weight (calculated)
35675.9 Da
IEP (calculated)
6.270
GRAVY (calculated)
-0.635
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDYKEFEF DSGDSDLELG RDGVAEEDNN DEVDEIMSFV AIKRSLSKDD LSTMSSAGFH DRPAQRSAKR KRKNQFRGIR QRPWGKWAAE IRDPIKGFRV
101: WLGTFNSAEE AARAYDVEAR RIRGKKAKLN FPMEPTVPQK HHAPPVVPKV PKRSTTKEHS FVPAINNLAN KNASVYPSAD FASKHPLGQP GNMPFVPVMN
201: SLAPVEAPVI NMCSDRGSTS FGCSNLGWEY YTKTPHISAT APISTIAEGD ESLLVKGNTN NSVVPPVMEN DAANFEPWIR YLMDDTVDQL IDSLLNFDVP
301: RDVAANFSKG TKPCISEQRE
101: WLGTFNSAEE AARAYDVEAR RIRGKKAKLN FPMEPTVPQK HHAPPVVPKV PKRSTTKEHS FVPAINNLAN KNASVYPSAD FASKHPLGQP GNMPFVPVMN
201: SLAPVEAPVI NMCSDRGSTS FGCSNLGWEY YTKTPHISAT APISTIAEGD ESLLVKGNTN NSVVPPVMEN DAANFEPWIR YLMDDTVDQL IDSLLNFDVP
301: RDVAANFSKG TKPCISEQRE
001: MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP FVFSSTHKHH ASGSASDGKK KQSSRYKGIR RRPWGRWAAE IRDPIKGVRV
101: WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
201: KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS LFDGGNDMGL WS
101: WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
201: KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS LFDGGNDMGL WS
Arabidopsis Description
HRE1Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IDA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.