Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G126600.1 | Wheat | nucleus | 84.75 | 54.64 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 83.9 | 52.24 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 75.42 | 48.9 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 68.64 | 40.7 |
| TraesCSU01G183700.1 | Wheat | nucleus | 48.31 | 40.14 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 65.25 | 40.0 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 52.12 | 38.44 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 46.19 | 34.94 |
| Zm00001d052087_P001 | Maize | nucleus | 51.27 | 33.52 |
| EES07642 | Sorghum | nucleus | 51.27 | 32.88 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 28.81 | 32.38 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 52.54 | 32.38 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 37.29 | 31.54 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 21.61 | 27.57 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 41.1 | 27.32 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 37.71 | 26.89 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 35.17 | 25.15 |
| KRH69017 | Soybean | nucleus | 36.44 | 24.93 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 19.49 | 24.6 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 38.98 | 24.27 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 39.41 | 24.09 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 19.07 | 23.94 |
| KRG97290 | Soybean | nucleus | 29.66 | 23.41 |
| TraesCS4B01G299400.1 | Wheat | nucleus | 30.93 | 23.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.86 | 23.26 |
| Solyc06g063070.2.1 | Tomato | nucleus | 35.59 | 22.58 |
| KRH06265 | Soybean | nucleus | 36.44 | 22.51 |
| PGSC0003DMT400012547 | Potato | nucleus | 35.17 | 22.31 |
| TraesCS4B01G299500.1 | Wheat | nucleus | 29.66 | 22.15 |
| KRH47694 | Soybean | nucleus | 36.02 | 21.68 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 22.88 | 21.51 |
| TraesCS7B01G162100.1 | Wheat | plastid | 20.34 | 21.43 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 22.88 | 21.34 |
| PGSC0003DMT400023609 | Potato | nucleus | 35.17 | 21.28 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 23.31 | 21.24 |
| Solyc03g123500.2.1 | Tomato | nucleus | 34.32 | 20.98 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 21.19 | 20.66 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 23.31 | 20.6 |
| Zm00001d018305_P001 | Maize | nucleus | 24.58 | 20.57 |
| Solyc12g049560.1.1 | Tomato | nucleus | 33.47 | 20.47 |
| PGSC0003DMT400074248 | Potato | nucleus | 33.47 | 20.36 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 21.61 | 20.16 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 22.46 | 15.54 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6B01G126700 | EnsemblPlants:TraesCS6B01G126700.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:-:122186080..122187688
Molecular Weight (calculated)
26160.1 Da
IEP (calculated)
10.232
GRAVY (calculated)
-0.764
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAPLAAV KVPTVMRKMT KAALWPEKKK PRHGGSRGQR VTGLCGRRGP GLDDNEEDFE ADSGDSDLDL ERTMVDEKND DDEVGEIMSF AAVKNSLSQG
101: FDGPSAKRKR KNQFRGIRQR PWGKWAAEIR DPSKGSRVWL GTFNSAEEAA RAYDVEARMI RGNKAKVNFP TEPTVPQKRR ARPTAPKAPK RSLAHEPSVM
201: SSINNLANPN AFIYPSADFH QTSHLLCLTT CHLFLQ
101: FDGPSAKRKR KNQFRGIRQR PWGKWAAEIR DPSKGSRVWL GTFNSAEEAA RAYDVEARMI RGNKAKVNFP TEPTVPQKRR ARPTAPKAPK RSLAHEPSVM
201: SSINNLANPN AFIYPSADFH QTSHLLCLTT CHLFLQ
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.