Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G370700.1 | Wheat | nucleus | 92.88 | 93.58 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 92.13 | 92.13 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 67.79 | 72.11 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 71.16 | 71.97 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 65.92 | 67.95 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 45.69 | 50.41 |
| PGSC0003DMT400021311 | Potato | nucleus | 27.72 | 47.74 |
| Zm00001d005892_P001 | Maize | nucleus | 46.82 | 47.53 |
| EER96855 | Sorghum | mitochondrion, nucleus | 50.19 | 45.58 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 29.96 | 42.55 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 29.59 | 42.25 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 24.34 | 42.21 |
| KRH50274 | Soybean | nucleus | 33.71 | 39.13 |
| Bra034624.1-P | Field mustard | nucleus | 24.72 | 39.05 |
| Solyc10g050970.1.1 | Tomato | nucleus | 32.21 | 38.56 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 36.33 | 38.34 |
| KRH71142 | Soybean | nucleus | 29.96 | 37.21 |
| CDX72481 | Canola | nucleus | 35.58 | 36.82 |
| CDX76278 | Canola | nucleus | 36.33 | 36.6 |
| CDY46253 | Canola | nucleus | 35.58 | 36.4 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 33.33 | 36.03 |
| CDX69054 | Canola | nucleus | 35.21 | 35.61 |
| CDY45310 | Canola | nucleus | 34.46 | 35.25 |
| AT4G34410.1 | Thale cress | nucleus | 35.21 | 35.07 |
| Bra017656.1-P | Field mustard | nucleus | 34.46 | 34.07 |
| CDX75430 | Canola | nucleus | 33.33 | 33.97 |
| Bra011529.1-P | Field mustard | nucleus | 33.33 | 33.97 |
| CDX69056 | Canola | nucleus | 24.34 | 31.86 |
| PGSC0003DMT400066343 | Potato | nucleus | 32.96 | 29.83 |
| Solyc01g108240.2.1 | Tomato | nucleus | 32.96 | 29.83 |
| TraesCS7B01G162100.1 | Wheat | plastid | 24.34 | 29.02 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 19.48 | 28.11 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 20.97 | 26.67 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 25.09 | 26.48 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 20.6 | 23.31 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 28.84 | 22.58 |
| TraesCS4B01G299400.1 | Wheat | nucleus | 20.22 | 17.25 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 17.98 | 17.2 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 22.47 | 16.9 |
| TraesCS4B01G299500.1 | Wheat | nucleus | 19.1 | 16.14 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 23.22 | 15.58 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 21.35 | 15.57 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 22.47 | 15.54 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 21.72 | 15.06 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 16.85 | 14.42 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 16.1 | 12.99 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 17.98 | 12.53 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS1B01G389900 | EnsemblPlants:TraesCS1B01G389900.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:-:623688642..623689445
Molecular Weight (calculated)
28803.5 Da
IEP (calculated)
5.696
GRAVY (calculated)
-0.575
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFSVSAAME GGHGHEYMIR FDGHLEDPSP STATAEPPPP PPFAGRAISP EQEHGAMVAA LLHVISGYTT PPPDFFPAAA SKEVCPVCRV DGCLGCEFFG
101: AAEATGATAA ALDAPKAAVT AGGPQRRRRN KKNKYRGVRQ RPWGKWAAEI RDPRRAVRVW LGTFDAAEDA ARAYDRAAVE FRGPRAKLNF PFPEQQQQQL
201: GDGNAAAAKS GTCSPSPSSA EVEVRVPQTW QQNGGQETGD QLWDGLQDLM KLDESELWFP PSGNSWD
101: AAEATGATAA ALDAPKAAVT AGGPQRRRRN KKNKYRGVRQ RPWGKWAAEI RDPRRAVRVW LGTFDAAEDA ARAYDRAAVE FRGPRAKLNF PFPEQQQQQL
201: GDGNAAAAKS GTCSPSPSSA EVEVRVPQTW QQNGGQETGD QLWDGLQDLM KLDESELWFP PSGNSWD
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.