Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066343 | Potato | nucleus | 94.58 | 94.58 |
| Solyc10g050970.1.1 | Tomato | nucleus | 43.73 | 57.85 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 40.68 | 48.58 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 21.69 | 46.04 |
| KRH50274 | Soybean | nucleus | 34.58 | 44.35 |
| KRH71142 | Soybean | nucleus | 31.86 | 43.72 |
| Bra034624.1-P | Field mustard | nucleus | 24.07 | 42.01 |
| CDX72481 | Canola | nucleus | 35.59 | 40.7 |
| CDY45310 | Canola | nucleus | 35.25 | 39.85 |
| CDX69054 | Canola | nucleus | 35.59 | 39.77 |
| Bra011529.1-P | Field mustard | nucleus | 34.24 | 38.55 |
| CDX75430 | Canola | nucleus | 34.24 | 38.55 |
| Bra017656.1-P | Field mustard | nucleus | 35.25 | 38.52 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 25.76 | 38.38 |
| Solyc02g090800.1.1 | Tomato | nucleus | 16.95 | 38.17 |
| AT4G34410.1 | Thale cress | nucleus | 34.58 | 38.06 |
| CDY46253 | Canola | nucleus | 33.56 | 37.93 |
| CDX76278 | Canola | nucleus | 33.56 | 37.36 |
| CDX69056 | Canola | nucleus | 25.42 | 36.76 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 28.14 | 35.32 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 30.17 | 34.77 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 29.15 | 34.26 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 30.85 | 34.08 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 29.49 | 33.59 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 30.17 | 33.58 |
| Os08t0474000-01 | Rice | nucleus | 24.75 | 33.33 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 27.12 | 33.2 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 29.83 | 32.96 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 29.49 | 32.95 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 29.49 | 32.83 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 29.49 | 32.71 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 26.44 | 32.23 |
| Solyc02g090770.1.1 | Tomato | nucleus | 22.03 | 32.02 |
| Zm00001d031796_P001 | Maize | nucleus | 29.15 | 31.97 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 29.15 | 31.73 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 26.44 | 31.71 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 27.8 | 31.54 |
| Os09t0457900-01 | Rice | nucleus | 28.47 | 30.66 |
| OQU80635 | Sorghum | nucleus | 29.83 | 30.14 |
| Zm00001d005892_P001 | Maize | nucleus | 26.78 | 30.04 |
| EER96855 | Sorghum | mitochondrion, nucleus | 29.83 | 29.93 |
| Solyc02g090790.1.1 | Tomato | nucleus | 22.71 | 29.52 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 26.78 | 29.48 |
| Solyc12g056590.1.1 | Tomato | nucleus | 25.08 | 23.87 |
| Solyc03g118190.2.1 | Tomato | nucleus | 18.98 | 22.95 |
| Solyc04g051360.2.1 | Tomato | nucleus | 22.71 | 22.11 |
| Solyc01g065980.2.1 | Tomato | nucleus | 17.97 | 20.87 |
| Solyc09g075420.2.1 | Tomato | nucleus | 17.97 | 20.38 |
| Solyc12g042210.1.1 | Tomato | nucleus | 19.66 | 20.21 |
| Solyc06g068830.1.1 | Tomato | nucleus | 18.98 | 19.38 |
| Solyc04g071770.2.1 | Tomato | nucleus | 27.12 | 17.7 |
| Solyc04g012050.2.1 | Tomato | nucleus | 22.37 | 16.58 |
| Solyc06g063070.2.1 | Tomato | nucleus | 18.98 | 15.05 |
| Solyc03g123500.2.1 | Tomato | nucleus | 17.97 | 13.73 |
| Solyc12g049560.1.1 | Tomato | nucleus | 16.95 | 12.95 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4B340 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 |
| EnsemblPlantsGene:Solyc01g108240.2 | EnsemblPlants:Solyc01g108240.2.1 | UniParc:UPI0001D64C3F | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:+:95607487..95608774
Molecular Weight (calculated)
32670.4 Da
IEP (calculated)
5.881
GRAVY (calculated)
-0.767
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MHWLNKRFRQ EAGMNSNSNS LQNNNQFQQQ QPRLTGDEEY SVMVATLKNV INGNIPTQNY QEFNVFSPYN YSTATTTTNV TSSSSPSTSM STSFEQVLGV
101: SAEQEPCQFC RIQGCLGCDI FGTTFSSSSS APAAVAAPVA DNKKKSSSSS TATVAIAKKK KKNYRGVRQR PWGKWAAEIR DPRKAARVWL GTFTTAEEAA
201: RAYDKAAIEF RGPRAKLNFS FADYTVDTQE QQSTLSSSPQ QLPEEPQQSQ TANNNSDYGN EIWDQLMGDN EIQDWLTMMN FNGDSSDSGG NVHSF
101: SAEQEPCQFC RIQGCLGCDI FGTTFSSSSS APAAVAAPVA DNKKKSSSSS TATVAIAKKK KKNYRGVRQR PWGKWAAEIR DPRKAARVWL GTFTTAEEAA
201: RAYDKAAIEF RGPRAKLNFS FADYTVDTQE QQSTLSSSPQ QLPEEPQQSQ TANNNSDYGN EIWDQLMGDN EIQDWLTMMN FNGDSSDSGG NVHSF
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.