Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050718 | Potato | nucleus | 83.83 | 64.14 |
| Solyc02g090800.1.1 | Tomato | nucleus | 16.5 | 38.17 |
| Solyc02g090770.1.1 | Tomato | nucleus | 21.45 | 32.02 |
| KRH64120 | Soybean | nucleus | 28.71 | 30.96 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 27.06 | 30.94 |
| Solyc12g056590.1.1 | Tomato | nucleus | 31.02 | 30.32 |
| Solyc10g050970.1.1 | Tomato | nucleus | 22.11 | 30.04 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 34.32 | 29.55 |
| Solyc03g118190.2.1 | Tomato | nucleus | 23.76 | 29.51 |
| Bra031903.1-P | Field mustard | nucleus | 34.98 | 27.97 |
| CDY31304 | Canola | nucleus | 34.98 | 27.82 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 28.71 | 27.71 |
| KRH53825 | Soybean | nucleus | 29.37 | 27.64 |
| Bra024325.1-P | Field mustard | nucleus | 35.64 | 27.34 |
| Solyc02g090790.1.1 | Tomato | nucleus | 20.46 | 27.31 |
| CDY46821 | Canola | nucleus | 34.32 | 27.23 |
| CDY08853 | Canola | nucleus | 35.31 | 27.09 |
| CDY14506 | Canola | nucleus | 34.98 | 27.04 |
| Bra037794.1-P | Field mustard | nucleus | 33.99 | 27.03 |
| AT5G64750.1 | Thale cress | nucleus | 34.65 | 26.85 |
| KRH43369 | Soybean | nucleus | 26.07 | 26.69 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 28.71 | 26.61 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 28.38 | 26.22 |
| CDX81250 | Canola | nucleus | 34.32 | 25.81 |
| Solyc12g042210.1.1 | Tomato | nucleus | 24.42 | 25.78 |
| Solyc04g012050.2.1 | Tomato | nucleus | 33.66 | 25.63 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 28.05 | 24.93 |
| Solyc06g068830.1.1 | Tomato | nucleus | 23.76 | 24.91 |
| KRH59504 | Soybean | nucleus | 27.72 | 24.35 |
| Zm00001d053195_P002 | Maize | nucleus | 26.4 | 24.32 |
| Solyc01g065980.2.1 | Tomato | nucleus | 19.47 | 23.23 |
| OQU82952 | Sorghum | mitochondrion | 24.75 | 22.8 |
| Solyc01g108240.2.1 | Tomato | nucleus | 22.11 | 22.71 |
| Solyc04g071770.2.1 | Tomato | nucleus | 33.66 | 22.57 |
| OQU78803 | Sorghum | nucleus | 24.75 | 21.99 |
| Solyc09g075420.2.1 | Tomato | nucleus | 18.81 | 21.92 |
| Zm00001d023535_P001 | Maize | nucleus | 29.04 | 20.8 |
| Os12t0168100-01 | Rice | nucleus | 22.44 | 19.94 |
| Solyc06g063070.2.1 | Tomato | nucleus | 21.45 | 17.47 |
| Solyc03g123500.2.1 | Tomato | nucleus | 19.8 | 15.54 |
| Solyc12g049560.1.1 | Tomato | nucleus | 18.81 | 14.77 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006970 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009749 |
| GO:GO:0009788 | GO:GO:0009987 | GO:GO:0050832 | GO:GO:1902074 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:K4BS96 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc04g051360.2 | EnsemblPlants:Solyc04g051360.2.1 | UniParc:UPI0001D64C3D | SEG:seg |
Description
No Description!
Coordinates
chr4:+:50428809..50430249
Molecular Weight (calculated)
33806.0 Da
IEP (calculated)
7.017
GRAVY (calculated)
-0.691
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MCNIVHYKVA NSNDNRSSRQ DDEGINVFNT MFQGNINREE EMSVMVSALT RVVVGNHPSE NIENHHQNNT LISRGVGEKR GRDEVLLHGT NSSHMILSSG
101: GEGSSIRTTR EATFIYTNST NNSIIDESVN NQVRRRYRGV RQRPWGKWAA EIRDPYKAAR VWLGTFDTAE GAARAYDEAA LTFRGSKAKL NFPENVTLLV
201: PSSIQQPIYS SPDPAISPYR SNFIIGHTST EVEPILHTNP SNFIEPIAHT SSLYRSNFIE RNHHMVQQEP YFQAGSTSGG SDFHQTTNSS NSSIYDHPSS
301: SSG
101: GEGSSIRTTR EATFIYTNST NNSIIDESVN NQVRRRYRGV RQRPWGKWAA EIRDPYKAAR VWLGTFDTAE GAARAYDEAA LTFRGSKAKL NFPENVTLLV
201: PSSIQQPIYS SPDPAISPYR SNFIIGHTST EVEPILHTNP SNFIEPIAHT SSLYRSNFIE RNHHMVQQEP YFQAGSTSGG SDFHQTTNSS NSSIYDHPSS
301: SSG
001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
Arabidopsis Description
ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.