CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64120	Soybean	nucleus	70.5	80.78
KRH59733	Soybean	cytosol, mitochondrion, nucleus	16.46	43.44
VIT_07s0031g01980.t01	Wine grape	nucleus	41.3	37.78
KRH63877	Soybean	nucleus	21.12	33.83
GSMUA_Achr6P18020_001	Banana	nucleus	27.02	32.83
KRH01504	Soybean	nucleus	23.91	31.82
KRH70063	Soybean	nucleus	22.36	31.58
KRH63879	Soybean	nucleus	25.47	31.3
KRH54084	Soybean	nucleus	26.09	31.23
KRH43369	Soybean	nucleus	27.95	30.41
KRH50274	Soybean	nucleus	21.12	29.57
Bra031903.1-P	Field mustard	nucleus	34.78	29.55
CDY31304	Canola	nucleus	34.78	29.4
Solyc04g051360.2.1	Tomato	nucleus	27.64	29.37
CDY46821	Canola	nucleus	34.78	29.32
KRH35113	Soybean	nucleus, plastid	24.84	29.3
KRH08410	Soybean	nucleus	21.74	29.29
KRH45195	Soybean	nucleus	24.53	28.52
KRG91682	Soybean	nucleus	24.53	28.32
AT5G64750.1	Thale cress	nucleus	34.16	28.13
Bra024325.1-P	Field mustard	nucleus	34.47	28.1
KRH71142	Soybean	nucleus	18.63	27.91
CDY08853	Canola	nucleus	34.16	27.85
KRH59504	Soybean	nucleus	29.81	27.83
KRH06816	Soybean	nucleus	22.36	27.69
CDY14506	Canola	nucleus	33.23	27.3
Bra037794.1-P	Field mustard	nucleus	31.99	27.03
CDX81250	Canola	nucleus	32.61	26.05
Zm00001d053195_P002	Maize	nucleus	26.4	25.84
KRH12100	Soybean	nucleus	17.39	25.11
PGSC0003DMT400050718	Potato	nucleus	30.75	25.0
OQU78803	Sorghum	nucleus	26.4	24.93
HORVU5Hr1G036590.2	Barley	nucleus	24.22	24.84
OQU82952	Sorghum	mitochondrion	25.16	24.62
TraesCS5D01G129400.1	Wheat	nucleus	24.53	24.16
TraesCS5A01G112600.1	Wheat	nucleus	24.53	24.09
KRH37061	Soybean	nucleus	17.08	23.21
TraesCS5B01G118200.1	Wheat	nucleus	24.53	23.17
KRG96472	Soybean	mitochondrion	15.84	23.08
KRG94719	Soybean	nucleus	23.6	22.29
KRG97290	Soybean	nucleus	19.25	20.74
KRH08660	Soybean	nucleus	28.57	20.31
Zm00001d023535_P001	Maize	nucleus	26.09	19.86
Os12t0168100-01	Rice	nucleus	20.19	19.06
KRH70269	Soybean	nucleus	29.19	18.99
KRH69017	Soybean	nucleus	20.19	18.84
KRH69270	Soybean	nucleus	17.08	18.33
KRH31850	Soybean	nucleus	17.08	18.09
KRH47694	Soybean	nucleus	20.5	16.84
KRH06265	Soybean	nucleus	19.88	16.75

Protein Annotations

EntrezGene:100796247	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02003486	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_06G148400	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7KV47	EnsemblPlants:KRH53825	ProteinID:KRH53825	ProteinID:KRH53825.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF41	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI00023381AB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:12120125..12122336

Molecular Weight (calculated)

35012.4 Da

IEP (calculated)

9.146

GRAVY (calculated)

-0.509

Length

322 amino acids

Sequence
(BLAST)

001: MNNPTLSRLF PGLNREREMS AMVSALTHVV SGEVPITGDS SSSSSLVLHH QPHDDTVIVT PTMPSSSSSS TYVVGTSSLK RSRENDTYTS SLFSHPPSSS
101: PAMPTRAEYA TREMGNSVYE YRTTTENATR DEGRRKYRGV RQRPWGKWAA EIRDPVEAAR VWLGTFDTAE AAARAYDEAA LRFRGNKAKL NFPENVTLRQ
201: PQFTVSNSPS SLVSITTSTD PVVHSTRPLL LPSQASTATN VYEYFQLSGF PTNTNLYDGN RMFVTSNAMA SHHLQSSSSL LSSSSSAFVS SVTSQDTSLS
301: SLYSGQLPPW SKVSGHSSSS SG

Best Arabidopsis Sequence Match ( AT5G64750.1 )
(BLAST)

001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S

Arabidopsis Description

ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.