CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031903.1-P	Field mustard	nucleus	99.48	100.0
CDY46821	Canola	nucleus	95.8	95.55
AT5G64750.1	Thale cress	nucleus	82.41	80.31
CDY14506	Canola	nucleus	81.36	79.08
CDY08853	Canola	nucleus	81.63	78.73
CDX81250	Canola	nucleus	76.9	72.7
KRH64120	Soybean	nucleus	27.82	37.72
CDY37698	Canola	mitochondrion	16.01	36.09
Solyc04g051360.2.1	Tomato	nucleus	27.82	34.98
KRH53825	Soybean	nucleus	29.4	34.78
CDY27480	Canola	nucleus	17.32	34.2
CDY51428	Canola	nucleus	17.59	34.18
CDY53152	Canola	nucleus	20.21	34.07
GSMUA_Achr6P18020_001	Banana	nucleus	22.57	32.45
CDY17191	Canola	nucleus	18.37	32.41
VIT_07s0031g01980.t01	Wine grape	nucleus	29.92	32.39
CDY27952	Canola	nucleus	18.11	31.94
CDY14051	Canola	nucleus	21.26	31.64
CDY53788	Canola	golgi	16.27	31.63
CDY55173	Canola	nucleus	20.73	30.98
CDX98982	Canola	nucleus	20.47	30.83
CDX70027	Canola	nucleus	20.47	30.83
CDX69647	Canola	nucleus	17.32	30.41
KRH43369	Soybean	nucleus	23.62	30.41
HORVU5Hr1G036590.2	Barley	nucleus	24.93	30.25
CDX72909	Canola	nucleus	14.7	29.79
CDY09787	Canola	nucleus	17.32	29.6
TraesCS5A01G112600.1	Wheat	nucleus	25.46	29.57
CDX78288	Canola	nucleus	19.42	29.02
KRH59504	Soybean	nucleus	26.25	28.99
TraesCS5D01G129400.1	Wheat	nucleus	24.67	28.75
CDX78517	Canola	nucleus	19.42	28.68
PGSC0003DMT400050718	Potato	nucleus	29.66	28.54
CDX75430	Canola	nucleus	19.42	28.24
CDX69054	Canola	nucleus	19.42	28.03
CDX70498	Canola	nucleus	18.9	27.91
TraesCS5B01G118200.1	Wheat	nucleus	24.93	27.86
CDX85656	Canola	nucleus	18.11	27.71
CDY46253	Canola	nucleus	18.64	27.2
CDX76278	Canola	nucleus	18.9	27.17
CDY45310	Canola	nucleus	18.37	26.82
CDX91131	Canola	nucleus	17.85	26.77
CDX72481	Canola	nucleus	18.11	26.74
CDY34977	Canola	nucleus	16.8	26.56
CDX69056	Canola	nucleus	14.17	26.47
CDX68269	Canola	nucleus	15.22	26.24
CDY28337	Canola	nucleus	16.54	25.93
CDX82392	Canola	nucleus	16.54	25.71
CDY54628	Canola	nucleus	16.54	25.71
CDX92094	Canola	nucleus	16.27	25.62
CDY50643	Canola	nucleus	15.22	25.55
CDX95906	Canola	nucleus	16.27	25.41
Zm00001d053195_P002	Maize	nucleus	21.78	25.23
OQU82952	Sorghum	mitochondrion	21.78	25.23
OQU78803	Sorghum	nucleus	21.26	23.75
CDX82492	Canola	nucleus	20.73	22.44
CDX75756	Canola	nucleus	20.21	22.13
CDX96402	Canola	nucleus	14.44	22.0
CDY02492	Canola	nucleus	16.8	20.91
CDY65334	Canola	nucleus	20.73	20.63
CDX98435	Canola	nucleus	20.47	20.58
Zm00001d023535_P001	Maize	nucleus	22.83	20.57
CDY25681	Canola	nucleus	16.54	20.52
CDY39107	Canola	nucleus	21.0	20.51
Os12t0168100-01	Rice	nucleus	18.11	20.23
CDX97559	Canola	nucleus	20.73	18.5
CDY71587	Canola	cytosol	2.1	11.59

Protein Annotations

MapMan:15.5.7.1	MapMan:15.5.7.2	Gene3D:3.30.730.10	GO:A0A078H1I5	UniProt:A0A078H1I5	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EnsemblPlants:CDY31304	ProteinID:CDY31304	ProteinID:CDY31304.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00047471001	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF66	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0004EE5A59	SEG:seg	:	:	:

Description

BnaA02g34370DBnaA02g34370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1I5]

Coordinates

chrLK032270:-:116480..118606

Molecular Weight (calculated)

42273.5 Da

IEP (calculated)

8.825

GRAVY (calculated)

-0.894

Length

381 amino acids

Sequence
(BLAST)

001: MCTLKVANQE DNVGKKAEPT TREDDHRTLS DMDQWFYLFP AEDSHLHHRD NALTPPSSSL MPSFSREMEM SAIVSALTHV VSGNVPPHQF VGGGEGTSNS
101: SSSSGQKKRR REVEEGGGGG KSVKAANTLT VDQYFSGGNS SSRVREASSN MSGSGPTYEY TTTTTTNTET SSLNGDQQPR RRYRGVRQRP WGKWAAEIRD
201: PFKAARVWLG TFDNAESAAR AYDEAALRFR GNKAKLNFPE NVKLVRPATT QSVQQTTAVQ TPTQFRNSTS TSTLLPLRPA VDSQPLIQPY NLSYSEMARH
301: QQQFQQHNHQ QTMDLYDQMS FPLRFGYTGD SMMQSTSSSS SHSRPLFSPA AVQPSETGYL QDIQWSPDKT SNHNYNNSSS S

Best Arabidopsis Sequence Match ( AT5G64750.1 )
(BLAST)

001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S

Arabidopsis Description

ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.