Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024325.1-P | Field mustard | nucleus | 97.72 | 97.72 |
| CDY14506 | Canola | nucleus | 94.43 | 95.15 |
| CDY31304 | Canola | nucleus | 78.73 | 81.63 |
| CDY46821 | Canola | nucleus | 78.48 | 81.15 |
| AT5G64750.1 | Thale cress | nucleus | 79.24 | 80.05 |
| CDX81250 | Canola | nucleus | 74.94 | 73.45 |
| KRH64120 | Soybean | nucleus | 26.58 | 37.37 |
| CDY37698 | Canola | mitochondrion | 15.19 | 35.5 |
| Solyc04g051360.2.1 | Tomato | nucleus | 27.09 | 35.31 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 23.04 | 34.34 |
| KRH53825 | Soybean | nucleus | 27.85 | 34.16 |
| CDY27480 | Canola | nucleus | 16.46 | 33.68 |
| CDY51428 | Canola | nucleus | 16.71 | 33.67 |
| CDY53152 | Canola | nucleus | 19.24 | 33.63 |
| CDY14051 | Canola | nucleus | 21.52 | 33.2 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 29.11 | 32.67 |
| CDY55173 | Canola | nucleus | 21.01 | 32.55 |
| CDY17191 | Canola | nucleus | 17.72 | 32.41 |
| CDX70027 | Canola | nucleus | 20.51 | 32.02 |
| CDX98982 | Canola | nucleus | 20.51 | 32.02 |
| CDY27952 | Canola | nucleus | 17.47 | 31.94 |
| CDX69647 | Canola | nucleus | 16.96 | 30.88 |
| KRH43369 | Soybean | nucleus | 23.04 | 30.74 |
| CDY53788 | Canola | golgi | 15.19 | 30.61 |
| CDX78288 | Canola | nucleus | 19.75 | 30.59 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 24.3 | 30.57 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 25.32 | 30.49 |
| CDX78517 | Canola | nucleus | 19.75 | 30.23 |
| CDY09787 | Canola | nucleus | 16.96 | 30.04 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 24.81 | 29.97 |
| CDX70498 | Canola | nucleus | 19.24 | 29.46 |
| CDX72909 | Canola | nucleus | 13.92 | 29.26 |
| KRH59504 | Soybean | nucleus | 25.32 | 28.99 |
| CDX85656 | Canola | nucleus | 18.23 | 28.92 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 24.81 | 28.74 |
| PGSC0003DMT400050718 | Potato | nucleus | 28.35 | 28.28 |
| CDX91131 | Canola | nucleus | 17.97 | 27.95 |
| CDX69054 | Canola | nucleus | 18.23 | 27.27 |
| CDX75430 | Canola | nucleus | 17.97 | 27.1 |
| CDY34977 | Canola | nucleus | 16.2 | 26.56 |
| CDY46253 | Canola | nucleus | 17.47 | 26.44 |
| CDX76278 | Canola | nucleus | 17.72 | 26.42 |
| CDY45310 | Canola | nucleus | 17.22 | 26.05 |
| CDX92094 | Canola | nucleus | 15.95 | 26.03 |
| CDX72481 | Canola | nucleus | 16.96 | 25.97 |
| CDY28337 | Canola | nucleus | 15.95 | 25.93 |
| CDX68269 | Canola | nucleus | 14.43 | 25.79 |
| CDX95906 | Canola | nucleus | 15.7 | 25.41 |
| CDX82392 | Canola | nucleus | 15.7 | 25.31 |
| CDY54628 | Canola | nucleus | 15.7 | 25.31 |
| Zm00001d053195_P002 | Maize | nucleus | 21.01 | 25.23 |
| OQU82952 | Sorghum | mitochondrion | 20.76 | 24.92 |
| CDX69056 | Canola | nucleus | 12.66 | 24.51 |
| CDY50643 | Canola | nucleus | 13.92 | 24.23 |
| OQU78803 | Sorghum | nucleus | 19.75 | 22.87 |
| CDX96402 | Canola | nucleus | 14.43 | 22.8 |
| CDX82492 | Canola | nucleus | 19.24 | 21.59 |
| CDX75756 | Canola | nucleus | 18.73 | 21.26 |
| CDY02492 | Canola | nucleus | 16.2 | 20.91 |
| CDY25681 | Canola | nucleus | 16.2 | 20.85 |
| CDY65334 | Canola | nucleus | 19.75 | 20.37 |
| Zm00001d023535_P001 | Maize | nucleus | 21.52 | 20.09 |
| CDX98435 | Canola | nucleus | 19.24 | 20.05 |
| CDY39107 | Canola | nucleus | 19.75 | 20.0 |
| Os12t0168100-01 | Rice | nucleus | 17.22 | 19.94 |
| CDX97559 | Canola | nucleus | 19.49 | 18.03 |
| CDY71587 | Canola | cytosol | 1.77 | 10.14 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FAJ0 | UniProt:A0A078FAJ0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY08853 | ProteinID:CDY08853 | ProteinID:CDY08853.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00000822001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEBD66 | SEG:seg | : | : | : | : |
Description
BnaA06g23710DBnaA06g23710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAJ0]
Coordinates
chrLK031989:-:876861..879252
Molecular Weight (calculated)
43200.2 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.879
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTIKVANQD GNVGKKAEPT TGEDDHGTLS DIDQWLYLFA AEDDHLHRDN AFTPPYSSSS LMTSYNREME MSAIVSALTH VVAGNVPTHQ YGDGSGGGGG
101: GEGNSNSSSS SGQKRRREVE EDGGGGKAVE AANTLTVDQY FSSGSSTSKV REASSNMSGG SGPTYEYTTT ENGTTETSSS SGDQPRRRYR GVRQRPWGKW
201: AAEIRDPFKA ARVWLGTFDN AESAARAYDE AALRFRGNKA KLNFPENVKL VRPTATQSVP QTAVQRPTQL RNSSSTSTLL PIRPASEQIV HSQPLMQPYN
301: MSYSEMTRQQ QQFQHHHQQR SMDLYDQLSF SLPFSHTGDS TMLSTSSSSS HSRPLFSPAA VQQPSESASE TGYFKELKWL PDKTNNNNYS NSPSS
101: GEGNSNSSSS SGQKRRREVE EDGGGGKAVE AANTLTVDQY FSSGSSTSKV REASSNMSGG SGPTYEYTTT ENGTTETSSS SGDQPRRRYR GVRQRPWGKW
201: AAEIRDPFKA ARVWLGTFDN AESAARAYDE AALRFRGNKA KLNFPENVKL VRPTATQSVP QTAVQRPTQL RNSSSTSTLL PIRPASEQIV HSQPLMQPYN
301: MSYSEMTRQQ QQFQHHHQQR SMDLYDQLSF SLPFSHTGDS TMLSTSSSSS HSRPLFSPAA VQQPSESASE TGYFKELKWL PDKTNNNNYS NSPSS
001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
Arabidopsis Description
ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.