Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023404.1-P | Field mustard | nucleus | 94.88 | 96.79 |
| CDX85656 | Canola | nucleus | 94.88 | 96.79 |
| CDX69647 | Canola | nucleus | 71.65 | 83.87 |
| CDY09787 | Canola | nucleus | 72.05 | 82.06 |
| CDX70498 | Canola | nucleus | 83.07 | 81.78 |
| AT5G13330.1 | Thale cress | nucleus | 68.11 | 81.6 |
| CDX78517 | Canola | nucleus | 82.28 | 81.01 |
| KRH01504 | Soybean | nucleus | 38.19 | 40.08 |
| KRH45195 | Soybean | nucleus | 42.91 | 39.35 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 35.43 | 37.97 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 25.59 | 36.72 |
| CDY37698 | Canola | mitochondrion | 24.41 | 36.69 |
| CDX70027 | Canola | nucleus | 36.22 | 36.36 |
| CDX98982 | Canola | nucleus | 36.22 | 36.36 |
| CDY14051 | Canola | nucleus | 36.22 | 35.94 |
| CDY53152 | Canola | nucleus | 31.5 | 35.4 |
| CDY55173 | Canola | nucleus | 35.43 | 35.29 |
| CDX78288 | Canola | nucleus | 35.04 | 34.9 |
| GSMUA_Achr10P... | Banana | nucleus | 30.32 | 33.92 |
| CDY17191 | Canola | nucleus | 27.95 | 32.87 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 32.28 | 32.67 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 32.28 | 32.41 |
| CDY27952 | Canola | nucleus | 27.17 | 31.94 |
| CDY53788 | Canola | golgi | 24.41 | 31.63 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 31.5 | 31.62 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 33.07 | 28.87 |
| Os04t0398000-02 | Rice | nucleus | 30.32 | 28.73 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 31.1 | 28.42 |
| CDY27480 | Canola | nucleus | 20.87 | 27.46 |
| CDY51428 | Canola | nucleus | 20.87 | 27.04 |
| CDX72909 | Canola | nucleus | 18.9 | 25.53 |
| CDX72481 | Canola | nucleus | 23.23 | 22.87 |
| CDY28337 | Canola | nucleus | 21.65 | 22.63 |
| CDY34977 | Canola | nucleus | 21.26 | 22.41 |
| CDY46253 | Canola | nucleus | 22.83 | 22.22 |
| CDX68269 | Canola | nucleus | 19.29 | 22.17 |
| CDX75430 | Canola | nucleus | 22.83 | 22.14 |
| CDX95906 | Canola | nucleus | 21.26 | 22.13 |
| CDX92094 | Canola | nucleus | 20.87 | 21.9 |
| CDX76278 | Canola | nucleus | 22.83 | 21.89 |
| CDY45310 | Canola | nucleus | 22.44 | 21.84 |
| CDX69054 | Canola | nucleus | 22.44 | 21.59 |
| CDY50643 | Canola | nucleus | 19.29 | 21.59 |
| CDX82392 | Canola | nucleus | 20.47 | 21.22 |
| CDY54628 | Canola | nucleus | 20.47 | 21.22 |
| CDX69056 | Canola | nucleus | 16.14 | 20.1 |
| CDX96402 | Canola | nucleus | 19.29 | 19.6 |
| OQU81440 | Sorghum | nucleus | 36.22 | 18.55 |
| CDY14506 | Canola | nucleus | 27.95 | 18.11 |
| CDY08853 | Canola | nucleus | 27.95 | 17.97 |
| CDY31304 | Canola | nucleus | 26.77 | 17.85 |
| CDY46821 | Canola | nucleus | 26.77 | 17.8 |
| CDX81250 | Canola | nucleus | 26.38 | 16.63 |
| CDY71587 | Canola | cytosol | 4.33 | 15.94 |
| CDX75756 | Canola | nucleus | 21.65 | 15.8 |
| CDX82492 | Canola | nucleus | 21.65 | 15.62 |
| CDY02492 | Canola | nucleus | 17.72 | 14.71 |
| CDY25681 | Canola | nucleus | 17.32 | 14.33 |
| CDY65334 | Canola | nucleus | 21.26 | 14.1 |
| CDX98435 | Canola | nucleus | 20.87 | 13.98 |
| CDY39107 | Canola | nucleus | 21.26 | 13.85 |
| CDX97559 | Canola | nucleus | 21.26 | 12.65 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078DPJ6 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX91131 |
| ProteinID:CDX91131 | ProteinID:CDX91131.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151919001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF58 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EBE34E | SEG:seg | : | : | : | : |
Description
BnaC02g04660D
Coordinates
chrLK031865:-:905280..907230
Molecular Weight (calculated)
28737.8 Da
IEP (calculated)
4.760
GRAVY (calculated)
-1.048
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRMYGKGPA PPETSAEEYP SWNESDVTAM MSSFSNVIEY PAADGHEMSD PPVKQELDKS DQLQQDQDQP RKKHYRGVRQ RPWGKWAAEI RDPKKAARVW
101: LGTFETAEEA ALAYDRAALK FKGTKAKLNF PERVQGPSTT SYVASQSSCD HAPRDGNELM NSAPPLLGPS TTTTTTSWPT DYNQDILQYA QLLTSNNDVD
201: LSYYTSTLFS SQQQPFSTPS SSSSSSLTSQ QMQQQPQREE EKNYGYNYYY YPRE
101: LGTFETAEEA ALAYDRAALK FKGTKAKLNF PERVQGPSTT SYVASQSSCD HAPRDGNELM NSAPPLLGPS TTTTTTSWPT DYNQDILQYA QLLTSNNDVD
201: LSYYTSTLFS SQQQPFSTPS SSSSSSLTSQ QMQQQPQREE EKNYGYNYYY YPRE
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.