Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G288000.1 Wheat nucleus 96.84 97.61
TraesCS2B01G304800.1 Wheat nucleus 96.84 96.84
HORVU2Hr1G071270.4 Barley nucleus 53.75 76.84
Os04t0398000-02 Rice nucleus 67.98 64.18
GSMUA_Achr10P... Banana nucleus 46.64 51.98
GSMUA_Achr6P08140_001 Banana nucleus 47.43 43.17
AT5G13330.1 Thale cress nucleus 33.6 40.09
VIT_01s0150g00120.t01 Wine grape nucleus, plastid 35.57 37.97
CDX69647 Canola nucleus 32.41 37.79
Bra008835.1-P Field mustard nucleus 32.02 37.33
CDY09787 Canola nucleus 32.02 36.32
GSMUA_Achr2P21430_001 Banana nucleus, plastid 39.92 34.71
OQU81440 Sorghum nucleus 66.8 34.07
KRH01504 Soybean nucleus 32.41 33.88
TraesCS7D01G265000.1 Wheat plastid 29.64 33.48
CDX85656 Canola nucleus 32.81 33.33
CDX78517 Canola nucleus 33.99 33.33
Bra023404.1-P Field mustard nucleus 32.81 33.33
Bra006195.1-P Field mustard nucleus 33.6 32.95
CDX70498 Canola nucleus 33.6 32.95
CDX91131 Canola nucleus 32.41 32.28
KRH45195 Soybean nucleus 33.99 31.05
TraesCS1D01G230900.1 Wheat nucleus 19.76 27.17
TraesCS6D01G299000.1 Wheat nucleus 20.16 27.13
TraesCS5D01G320800.1 Wheat nucleus 20.95 26.77
TraesCS6D01G298700.1 Wheat nucleus 19.37 26.2
TraesCS1D01G376600.1 Wheat nucleus 27.27 26.04
TraesCS1D01G376800.1 Wheat nucleus 26.48 25.09
TraesCS1D01G376700.1 Wheat nucleus 26.09 24.81
TraesCS1D01G376500.1 Wheat nucleus 25.69 23.99
TraesCS5D01G245300.1 Wheat nucleus 23.32 23.98
TraesCS5D01G129400.1 Wheat nucleus 30.04 23.24
TraesCS6D01G298800.1 Wheat nucleus 18.58 21.36
TraesCS6D01G299100.1 Wheat nucleus, plastid 21.34 18.18
TraesCS4D01G298400.1 Wheat nucleus 22.53 18.1
TraesCS6D01G085000.1 Wheat nucleus 22.13 17.28
TraesCS7D01G378200.1 Wheat nucleus 18.18 16.49
TraesCS5D01G223700.1 Wheat nucleus 24.51 16.27
TraesCS7D01G158500.1 Wheat nucleus 22.53 16.06
TraesCS6D01G084200.1 Wheat nucleus 22.53 15.04
TraesCS7D01G373700.1 Wheat nucleus 20.95 14.76
TraesCS6D01G084900.1 Wheat nucleus 22.13 14.4
TraesCS6D01G324200.1 Wheat nucleus 22.53 14.32
TraesCS7D01G416300.1 Wheat nucleus 18.18 13.9
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190PANTHER:PTHR31190:SF73SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:TraesCS2D01G286300EnsemblPlants:TraesCS2D01G286300.1TIGR:cd00018SEG:seg:
Description
No Description!
Coordinates
chr2D:+:365778377..365779561
Molecular Weight (calculated)
26962.5 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.521
Length
253 amino acids
Sequence
(BLAST)
001: MVSALSHVIR ATPDQQQAYY PAGSAAVSGE QQHQHDAAAA AAIAEEQGRK RHYRGVRQRP WGKWAAEIRD PKKAARVWLG TFDTAEDAAI AYDEAALRFK
101: GTKAKLNFPE RVQGRTDLGF VVTRGIPDRL QQQQQCPATV GAPAMRPLPH QQQTVVPYPD LMRYAQLLQG AGSAGGAVNL PFGAMSPPSM SSSSPHILDF
201: STQQLIRVSP TSPAAAISSS GTTGPSTSSS TTTASSPGAA WPYTGEHKNN KDS
Best Arabidopsis Sequence Match ( AT5G13330.1 )
(BLAST)
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.