Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008835.1-P | Field mustard | nucleus | 78.3 | 76.5 |
| CDX69647 | Canola | nucleus | 77.83 | 76.04 |
| CDY09787 | Canola | nucleus | 78.3 | 74.44 |
| CDX85656 | Canola | nucleus | 80.66 | 68.67 |
| Bra023404.1-P | Field mustard | nucleus | 80.66 | 68.67 |
| CDX91131 | Canola | nucleus | 81.6 | 68.11 |
| CDX78517 | Canola | nucleus | 80.66 | 66.28 |
| CDX70498 | Canola | nucleus | 80.66 | 66.28 |
| Bra006195.1-P | Field mustard | nucleus | 80.19 | 65.89 |
| KRH01504 | Soybean | nucleus | 45.75 | 40.08 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 32.55 | 38.98 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 43.4 | 38.82 |
| KRH45195 | Soybean | nucleus | 47.64 | 36.46 |
| GSMUA_Achr10P... | Banana | nucleus | 37.26 | 34.8 |
| AT1G43160.1 | Thale cress | nucleus | 31.13 | 34.38 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 40.09 | 33.86 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 40.09 | 33.6 |
| AT5G61890.1 | Thale cress | nucleus | 38.68 | 33.06 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 39.15 | 32.81 |
| AT5G07310.1 | Thale cress | nucleus | 40.09 | 32.32 |
| AT2G47520.1 | Thale cress | nucleus | 25.47 | 31.58 |
| Os04t0398000-02 | Rice | nucleus | 39.62 | 31.34 |
| AT2G33710.2 | Thale cress | nucleus | 33.49 | 30.74 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 39.62 | 30.22 |
| AT5G50080.2 | Thale cress | nucleus | 32.08 | 29.69 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 39.15 | 28.52 |
| AT4G34410.1 | Thale cress | nucleus | 28.3 | 22.39 |
| AT3G16770.1 | Thale cress | nucleus | 25.47 | 21.77 |
| AT5G64750.1 | Thale cress | nucleus | 35.38 | 19.18 |
| AT1G72360.2 | Thale cress | nucleus | 23.58 | 19.08 |
| OQU81440 | Sorghum | nucleus | 41.04 | 17.54 |
| AT1G53910.1 | Thale cress | nucleus | 25.0 | 14.8 |
| AT3G14230.1 | Thale cress | nucleus | 25.94 | 14.51 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:831174 | UniProt:A0A178UKL8 | ProteinID:AED91881.1 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT5G13330 | EnsemblPlantsGene:AT5G13330 | RefSeq:AT5G13330 | TAIR:AT5G13330 | RefSeq:AT5G13330-TAIR-G |
| EnsemblPlants:AT5G13330.1 | TAIR:AT5G13330.1 | EMBL:AY560861 | EMBL:BT011609 | EMBL:BT012250 | ProteinID:CAB86640.1 |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 |
| GO:GO:0009723 | GO:GO:0009737 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009873 | GO:GO:0009987 |
| GO:GO:0019748 | GO:GO:0019760 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:0071497 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_196837.1 | ProteinID:OAO93644.1 | PFAM:PF00847 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF58 | UniProt:Q9LYU3 | Symbol:Rap2.6L | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A35F5 |
| SEG:seg | : | : | : | : | : |
Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
Coordinates
chr5:+:4271730..4274674
Molecular Weight (calculated)
24288.9 Da
IEP (calculated)
9.115
GRAVY (calculated)
-1.178
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.