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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27480 Canola nucleus 67.25 59.59
CDY51428 Canola nucleus 67.84 59.18
Bra021401.1-P Field mustard nucleus 67.84 54.46
AT3G16770.1 Thale cress nucleus 42.69 29.44
TraesCS1A01G231200.1 Wheat nucleus 30.41 28.89
AT1G72360.2 Thale cress nucleus 43.86 28.63
TraesCS1D01G230900.1 Wheat nucleus 29.82 27.72
GSMUA_Achr3P08180_001 Banana nucleus 31.58 27.41
HORVU1Hr1G058940.4 Barley nucleus, plastid 29.24 26.88
AT1G43160.1 Thale cress nucleus 29.82 26.56
TraesCS1B01G243200.1 Wheat nucleus 28.66 26.49
Zm00001d037941_P001 Maize nucleus 29.82 26.42
Os05t0361700-01 Rice nucleus 29.82 25.76
EES18078 Sorghum nucleus 29.82 25.63
AT5G13330.1 Thale cress nucleus 31.58 25.47
AT2G33710.2 Thale cress nucleus 31.58 23.38
GSMUA_Achr8P22500_001 Banana nucleus 33.33 23.17
AT5G50080.2 Thale cress nucleus 30.99 23.14
AT5G61890.1 Thale cress nucleus 30.41 20.97
AT1G53910.1 Thale cress nucleus 43.86 20.95
AT3G14230.1 Thale cress nucleus 45.61 20.58
AT5G07310.1 Thale cress nucleus 30.99 20.15
AT4G34410.1 Thale cress nucleus 31.58 20.15
AT5G64750.1 Thale cress nucleus 35.09 15.35
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10EntrezGene:819365ProteinID:AAC62858.1ProteinID:AEC10854.1InterPro:AP2/ERF-transcript_factor
InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfArrayExpress:AT2G47520EnsemblPlantsGene:AT2G47520RefSeq:AT2G47520TAIR:AT2G47520
RefSeq:AT2G47520-TAIR-GEnsemblPlants:AT2G47520.1TAIR:AT2G47520.1EMBL:AY074645InterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006950
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009628GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0034059GO:GO:2000280
Symbol:HRE2InterPro:IPR001471InterPro:IPR036955RefSeq:NP_182274.1UniProt:O22259PFAM:PF00847
PIRSF:PIRSF038123PO:PO:0000037PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0007611
PO:PO:0009009PO:PO:0009010PO:PO:0009046PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190
PANTHER:PTHR31190:SF66SMART:SM00380SUPFAM:SSF54171UniParc:UPI00000AB5E6SEG:seg:
Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
Coordinates
chr2:-:19502776..19503702
Molecular Weight (calculated)
19347.6 Da
IEP (calculated)
6.834
GRAVY (calculated)
-0.858
Length
171 amino acids
Sequence
(BLAST)
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.