Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18078 | Sorghum | nucleus | 80.83 | 78.39 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 64.77 | 69.44 |
| TraesCS1D01G230900.1 | Wheat | nucleus | 65.28 | 68.48 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 62.69 | 65.41 |
| Os05t0361700-01 | Rice | nucleus | 64.25 | 62.63 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 53.89 | 55.91 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 50.78 | 49.75 |
| AT2G47520.1 | Thale cress | nucleus | 26.42 | 29.82 |
| Zm00001d031673_P001 | Maize | nucleus | 27.98 | 27.84 |
| CDY27480 | Canola | nucleus | 26.94 | 26.94 |
| CDY51428 | Canola | nucleus | 26.94 | 26.53 |
| Zm00001d009103_P001 | Maize | nucleus | 30.05 | 25.22 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 32.12 | 25.2 |
| Zm00001d021089_P001 | Maize | nucleus | 29.53 | 25.11 |
| Zm00001d040651_P001 | Maize | nucleus | 30.57 | 24.89 |
| Bra021401.1-P | Field mustard | nucleus | 26.94 | 24.41 |
| KRH12100 | Soybean | nucleus | 26.94 | 23.32 |
| Zm00001d018158_P001 | Maize | nucleus | 27.98 | 22.88 |
| Zm00001d052167_P001 | Maize | nucleus | 26.94 | 22.61 |
| KRH37061 | Soybean | nucleus | 26.42 | 21.52 |
| Solyc01g065980.2.1 | Tomato | nucleus | 27.98 | 21.26 |
| VIT_05s0077g01860.t01 | Wine grape | nucleus | 27.98 | 20.85 |
| PGSC0003DMT400043311 | Potato | nucleus | 27.98 | 20.45 |
| Zm00001d016616_P001 | Maize | nucleus | 25.91 | 19.61 |
| Zm00001d007033_P001 | Maize | plastid | 28.5 | 19.37 |
| Zm00001d031796_P001 | Maize | nucleus | 26.42 | 18.96 |
| Zm00001d005892_P001 | Maize | nucleus | 25.39 | 18.63 |
| Zm00001d053195_P002 | Maize | nucleus | 30.57 | 17.93 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 30.57 | 16.25 |
| Zm00001d032095_P001 | Maize | nucleus | 29.02 | 14.74 |
| Zm00001d027925_P001 | Maize | nucleus | 25.91 | 14.71 |
| Zm00001d052087_P001 | Maize | nucleus | 26.94 | 14.4 |
| Zm00001d005798_P001 | Maize | nucleus | 29.53 | 13.48 |
| Zm00001d020595_P001 | Maize | nucleus | 28.5 | 13.16 |
| Zm00001d023535_P001 | Maize | nucleus | 28.5 | 13.0 |
| Zm00001d047339_P001 | Maize | plastid | 26.94 | 11.53 |
| Zm00001d045386_P002 | Maize | plastid | 9.33 | 4.41 |
| Zm00001d018305_P001 | Maize | nucleus | 4.15 | 2.84 |
Protein Annotations
| EntrezGene:100280468 | Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQK85264.1 |
| InterPro:DNA-bd_dom_sf | UniProt:F1DK03 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EMBL:HQ858761 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF70 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001FF9268 | EnsemblPlantsGene:Zm00001d037941 |
| EnsemblPlants:Zm00001d037941_P001 | EnsemblPlants:Zm00001d037941_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 69Ethylene-responsive transcription factor RAP2-3
Coordinates
chr6:-:142909977..142911255
Molecular Weight (calculated)
19932.6 Da
IEP (calculated)
8.728
GRAVY (calculated)
-0.301
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIADF VPAGARRPAT DDTMSASILS GSEDHPELPL PLPAPAPGRK TAYRGIRRRP WGRWAAEIRD PRKGARVWLG TYATPEDAAR AYDVAAREIR
101: GPKAKLNFPP AVGGGARAPA PAAAKRRRKS AATEESSASS PPPPAAAAAV VVAGGGEEAL RDCMSGLEAF LGLQNADEGG GVEAWDAVDL MLA
101: GPKAKLNFPP AVGGGARAPA PAAAKRRRKS AATEESSASS PPPPAAAAAV VVAGGGEEAL RDCMSGLEAF LGLQNADEGG GVEAWDAVDL MLA
001: MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
Arabidopsis Description
RAP2-3Ethylene-responsive transcription factor RAP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P42736]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.