Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87998 | Sorghum | nucleus | 83.2 | 84.36 |
| Os06t0194000-02 | Rice | nucleus | 64.46 | 64.64 |
| Zm00001d052087_P001 | Maize | nucleus | 56.47 | 56.79 |
| Zm00001d018305_P001 | Maize | nucleus | 36.91 | 47.52 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 41.6 | 39.84 |
| KRH69017 | Soybean | nucleus | 37.19 | 39.13 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 35.26 | 38.79 |
| Zm00001d040651_P001 | Maize | nucleus | 25.07 | 38.4 |
| Zm00001d009103_P001 | Maize | nucleus | 24.24 | 38.26 |
| KRG97290 | Soybean | nucleus | 31.41 | 38.13 |
| Solyc06g063070.2.1 | Tomato | nucleus | 38.29 | 37.37 |
| Solyc03g123500.2.1 | Tomato | nucleus | 39.39 | 37.05 |
| KRH06265 | Soybean | nucleus | 38.57 | 36.65 |
| PGSC0003DMT400012547 | Potato | nucleus | 37.47 | 36.56 |
| PGSC0003DMT400023609 | Potato | nucleus | 39.12 | 36.41 |
| KRH47694 | Soybean | nucleus | 38.84 | 35.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.36 | 35.29 |
| Solyc12g049560.1.1 | Tomato | nucleus | 36.36 | 34.2 |
| PGSC0003DMT400074248 | Potato | nucleus | 35.81 | 33.51 |
| Zm00001d020595_P001 | Maize | nucleus | 36.09 | 31.34 |
| Zm00001d005798_P001 | Maize | nucleus | 35.81 | 30.73 |
| Zm00001d037941_P001 | Maize | nucleus | 16.25 | 30.57 |
| Zm00001d027925_P001 | Maize | nucleus | 27.82 | 29.71 |
| Zm00001d031673_P001 | Maize | nucleus | 14.33 | 26.8 |
| Zm00001d032095_P001 | Maize | nucleus | 27.27 | 26.05 |
| Zm00001d007033_P001 | Maize | plastid | 20.11 | 25.7 |
| Zm00001d021089_P001 | Maize | nucleus | 15.7 | 25.11 |
| Zm00001d047339_P001 | Maize | plastid | 29.48 | 23.73 |
| Zm00001d018158_P001 | Maize | nucleus | 14.88 | 22.88 |
| Zm00001d005892_P001 | Maize | nucleus | 16.53 | 22.81 |
| Zm00001d052167_P001 | Maize | nucleus | 13.77 | 21.74 |
| Zm00001d031796_P001 | Maize | nucleus | 15.98 | 21.56 |
| Zm00001d053195_P002 | Maize | nucleus | 18.18 | 20.06 |
| Zm00001d016616_P001 | Maize | nucleus | 13.77 | 19.61 |
| Zm00001d045386_P002 | Maize | plastid | 17.91 | 15.93 |
| Zm00001d023535_P001 | Maize | nucleus | 16.53 | 14.18 |
Protein Annotations
| EntrezGene:100279803 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQL01417.1 |
| UniProt:B8A023 | EMBL:BT054915 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EMBL:KJ728232 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000160BAD5 |
| EnsemblPlantsGene:Zm00001d045044 | EnsemblPlants:Zm00001d045044_P001 | EnsemblPlants:Zm00001d045044_T001 | SEG:seg | : | : |
Description
AP2-EREBP-transcription factor 160 AP2-EREBP-transcription factor 160
Coordinates
chr9:-:10942420..10945088
Molecular Weight (calculated)
39304.0 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.519
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAILSDI IPPPPPRRVT AGHLWPESKK PRRAASGRRG APVEQHEQEE DFEADFEEFE VESGESELES EDEPKPFAAP RSALARGGLN TGAAGVDGPA
101: ANSVKRKRKN QFRGIRRRPW GKWAAEIRDP RKGVRVWLGT FNSPEEAARA YDAEARRIRG KKAKVNFPDE VPTAVSQKRR AAGPASLKAP KMDVEEEKPI
201: IKLAVNNMTN SNAYHYPAVV GHNIIPEPFM QTQNMPFAPL VNYAALVNLS SDQGSNSFGC SDFSLENDSR TPDITSVPAP VATLAAVGES VFVQNTAGHA
301: VASPATGNTG VDLAELEPYM NFLMDGGSDD SISTLLSCDG SQDVVSNMDL WSFEDMPMSA GFY
101: ANSVKRKRKN QFRGIRRRPW GKWAAEIRDP RKGVRVWLGT FNSPEEAARA YDAEARRIRG KKAKVNFPDE VPTAVSQKRR AAGPASLKAP KMDVEEEKPI
201: IKLAVNNMTN SNAYHYPAVV GHNIIPEPFM QTQNMPFAPL VNYAALVNLS SDQGSNSFGC SDFSLENDSR TPDITSVPAP VATLAAVGES VFVQNTAGHA
301: VASPATGNTG VDLAELEPYM NFLMDGGSDD SISTLLSCDG SQDVVSNMDL WSFEDMPMSA GFY
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.