Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31168 | Sorghum | nucleus | 77.54 | 73.49 |
| Zm00001d052167_P001 | Maize | nucleus | 69.92 | 71.74 |
| Os02t0764700-01 | Rice | nucleus | 61.44 | 59.92 |
| TraesCS6A01G319600.1 | Wheat | nucleus | 58.05 | 55.47 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 58.47 | 54.55 |
| TraesCS6D01G299000.1 | Wheat | nucleus | 41.1 | 51.6 |
| HORVU6Hr1G078520.1 | Barley | nucleus | 40.68 | 51.34 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 40.68 | 51.06 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 40.25 | 50.8 |
| TraesCS6D01G298700.1 | Wheat | nucleus | 40.25 | 50.8 |
| TraesCS6A01G319500.1 | Wheat | nucleus | 39.83 | 50.0 |
| TraesCS6D01G299100.1 | Wheat | nucleus, plastid | 58.9 | 46.8 |
| TraesCS6D01G298800.1 | Wheat | nucleus | 43.22 | 46.36 |
| HORVU6Hr1G078510.5 | Barley | nucleus | 46.61 | 42.8 |
| Zm00001d005892_P001 | Maize | nucleus | 38.98 | 34.98 |
| Zm00001d031796_P001 | Maize | nucleus | 37.71 | 33.09 |
| Zm00001d037941_P001 | Maize | nucleus | 22.88 | 27.98 |
| Zm00001d031673_P001 | Maize | nucleus | 21.19 | 25.77 |
| Zm00001d009103_P001 | Maize | nucleus | 23.31 | 23.91 |
| Zm00001d040651_P001 | Maize | nucleus | 23.73 | 23.63 |
| Zm00001d021089_P001 | Maize | nucleus | 22.03 | 22.91 |
| Zm00001d016616_P001 | Maize | nucleus | 23.73 | 21.96 |
| Zm00001d053195_P002 | Maize | nucleus | 28.81 | 20.67 |
| Zm00001d027925_P001 | Maize | nucleus | 24.58 | 17.06 |
| Zm00001d007033_P001 | Maize | plastid | 20.34 | 16.9 |
| Zm00001d023535_P001 | Maize | nucleus | 30.08 | 16.78 |
| Zm00001d052087_P001 | Maize | nucleus | 23.31 | 15.24 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 22.88 | 14.88 |
| Zm00001d020595_P001 | Maize | nucleus | 22.88 | 12.92 |
| Zm00001d032095_P001 | Maize | nucleus | 20.76 | 12.89 |
| Zm00001d005798_P001 | Maize | nucleus | 22.46 | 12.53 |
| Zm00001d047339_P001 | Maize | plastid | 21.61 | 11.31 |
| Zm00001d045386_P002 | Maize | plastid | 8.47 | 4.9 |
| Zm00001d018305_P001 | Maize | nucleus | 4.24 | 3.55 |
Protein Annotations
| EntrezGene:100285604 | Gene3D:3.30.730.10 | MapMan:35.2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQK75173.1 |
| UniProt:B6UCL0 | InterPro:DNA-bd_dom_sf | EMBL:EU974975 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF80 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0000E647FB | EnsemblPlantsGene:Zm00001d018158 |
| EnsemblPlants:Zm00001d018158_P001 | EnsemblPlants:Zm00001d018158_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 139Ethylene-responsive element binding protein 2
Coordinates
chr5:-:215716411..215717121
Molecular Weight (calculated)
25016.6 Da
IEP (calculated)
8.936
GRAVY (calculated)
-0.343
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRLERGG FQLPNTEQEN SLFLRALISV VSGDTAALLP EAAAVEAPAA PVACARCGAD GCAAAGCCEL VAGSSSDSDD AGCSGTRANG GGLGLGLGAS
101: KRRGRGRKVI QYRGVRRRPW GKWAAEIRDP RRAARKWLGT FDTAEDAARA YDVAAVELRG QRAKLNFPAR AAAAAPAAVQ PPHHRPLPDR SLRENCGSNA
201: ASPVHVALAP TTQQNIWEGL NEIMMMEEER SFWSMR
101: KRRGRGRKVI QYRGVRRRPW GKWAAEIRDP RRAARKWLGT FDTAEDAARA YDVAAVELRG QRAKLNFPAR AAAAAPAAVQ PPHHRPLPDR SLRENCGSNA
201: ASPVHVALAP TTQQNIWEGL NEIMMMEEER SFWSMR
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.