Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047339_P001 | Maize | plastid | 70.45 | 66.08 |
| Zm00001d045386_P002 | Maize | plastid | 61.23 | 63.48 |
| Zm00001d020595_P001 | Maize | nucleus | 58.39 | 59.09 |
| Os09t0434500-01 | Rice | vacuole | 50.83 | 54.29 |
| GSMUA_Achr10P... | Banana | nucleus | 26.24 | 38.68 |
| KRH69017 | Soybean | nucleus | 29.31 | 35.94 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 30.73 | 35.81 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 31.91 | 35.62 |
| Zm00001d040651_P001 | Maize | nucleus | 19.62 | 35.02 |
| KRG97290 | Soybean | nucleus | 24.11 | 34.11 |
| Zm00001d009103_P001 | Maize | nucleus | 18.2 | 33.48 |
| Solyc12g049560.1.1 | Tomato | nucleus | 30.26 | 33.16 |
| PGSC0003DMT400074248 | Potato | nucleus | 30.26 | 32.99 |
| KRH47694 | Soybean | nucleus | 30.5 | 32.91 |
| Solyc03g123500.2.1 | Tomato | nucleus | 30.02 | 32.9 |
| KRH06265 | Soybean | nucleus | 29.55 | 32.72 |
| Solyc06g063070.2.1 | Tomato | nucleus | 28.61 | 32.53 |
| PGSC0003DMT400023609 | Potato | nucleus | 29.55 | 32.05 |
| PGSC0003DMT400012547 | Potato | nucleus | 27.9 | 31.72 |
| Zm00001d052087_P001 | Maize | nucleus | 26.95 | 31.58 |
| Zm00001d037941_P001 | Maize | nucleus | 13.48 | 29.53 |
| Zm00001d027925_P001 | Maize | nucleus | 23.64 | 29.41 |
| Zm00001d031673_P001 | Maize | nucleus | 11.82 | 25.77 |
| Zm00001d021089_P001 | Maize | nucleus | 13.48 | 25.11 |
| Zm00001d032095_P001 | Maize | nucleus | 22.22 | 24.74 |
| Zm00001d005892_P001 | Maize | nucleus | 14.89 | 23.95 |
| Zm00001d007033_P001 | Maize | plastid | 15.13 | 22.54 |
| Zm00001d018158_P001 | Maize | nucleus | 12.53 | 22.46 |
| Zm00001d031796_P001 | Maize | nucleus | 13.71 | 21.56 |
| Zm00001d052167_P001 | Maize | nucleus | 11.58 | 21.3 |
| Zm00001d053195_P002 | Maize | nucleus | 15.84 | 20.36 |
| Zm00001d016616_P001 | Maize | nucleus | 11.82 | 19.61 |
| Zm00001d018305_P001 | Maize | nucleus | 13.0 | 19.5 |
| Zm00001d023535_P001 | Maize | nucleus | 15.13 | 15.13 |
Protein Annotations
| EntrezGene:100283060 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | UniProt:B4FVN3 |
| EMBL:BT041171 | InterPro:DNA-bd_dom_sf | EMBL:EU963313 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EMBL:KJ727593 | ProteinID:ONM22136.1 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF8 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00017B7BEF | EnsemblPlantsGene:Zm00001d005798 | EnsemblPlants:Zm00001d005798_P001 | EnsemblPlants:Zm00001d005798_T001 | SEG:seg | : |
Description
AP2-EREBP-transcription factor 202Ethylene-responsive transcription factor RAP2-2
Coordinates
chr2:+:189023745..189025630
Molecular Weight (calculated)
44527.6 Da
IEP (calculated)
4.570
GRAVY (calculated)
-0.535
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAILSGF IPPSGVPAAA AAAKKKQQRR ATADLLWPGP GKKGAPREED FEADFREFER GLGEDDDVDG AGDEVQELPL PEPARLAFAA AVGAPRTAVD
101: GVMTPKDGEG DMPTTATNSA ANKRRRKNQY RGIRRRPWGK WAAEIRDPSK GVRVWLGTYS TAEEAARAYD AEARRIRGKK AKVNFRDEAA AAAGAQKAPA
201: ATTPTACGNA ARLGPPPPPP KFRADEVFGN MNGGTGSNDL FAIMFAFSDS SSKVVRVEPG EGAAGFLPAD LLPGSKRSAA NMLLLSDQSS DSYGSCDLGW
301: EWDWDDDTMT SDYASVFAPA APSNVVPAWY TQGGPVSKRT RSSYGYGAAM PGGFDPETNY QYQPLPYVVE SSPSDGASTD DMDCLQMMRA GDVPQDGASS
401: GGGGGDGGDI WSLDELLMAA GAY
101: GVMTPKDGEG DMPTTATNSA ANKRRRKNQY RGIRRRPWGK WAAEIRDPSK GVRVWLGTYS TAEEAARAYD AEARRIRGKK AKVNFRDEAA AAAGAQKAPA
201: ATTPTACGNA ARLGPPPPPP KFRADEVFGN MNGGTGSNDL FAIMFAFSDS SSKVVRVEPG EGAAGFLPAD LLPGSKRSAA NMLLLSDQSS DSYGSCDLGW
301: EWDWDDDTMT SDYASVFAPA APSNVVPAWY TQGGPVSKRT RSSYGYGAAM PGGFDPETNY QYQPLPYVVE SSPSDGASTD DMDCLQMMRA GDVPQDGASS
401: GGGGGDGGDI WSLDELLMAA GAY
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.