Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012547 | Potato | nucleus | 93.55 | 93.55 |
| Solyc03g123500.2.1 | Tomato | nucleus | 66.67 | 64.25 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 55.11 | 54.09 |
| KRH69017 | Soybean | nucleus | 48.12 | 51.88 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 37.1 | 50.37 |
| Solyc12g049560.1.1 | Tomato | nucleus | 51.08 | 49.22 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 45.7 | 44.27 |
| GSMUA_Achr10P... | Banana | nucleus | 30.38 | 42.01 |
| Solyc09g075420.2.1 | Tomato | nucleus | 28.76 | 41.15 |
| Os06t0194000-02 | Rice | nucleus | 39.52 | 40.61 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 38.44 | 40.51 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 38.44 | 40.28 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 38.17 | 40.0 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 38.71 | 39.67 |
| Os02t0782700-01 | Rice | nucleus | 38.71 | 39.45 |
| EER87998 | Sorghum | nucleus | 37.1 | 38.55 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 37.37 | 38.29 |
| Zm00001d052087_P001 | Maize | nucleus | 37.1 | 38.23 |
| EES07642 | Sorghum | nucleus | 37.63 | 38.04 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 38.17 | 37.67 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 38.98 | 37.56 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 37.1 | 37.4 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 38.98 | 37.18 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 37.9 | 37.01 |
| TraesCSU01G183700.1 | Wheat | nucleus | 28.23 | 36.97 |
| Os09t0434500-01 | Rice | vacuole | 39.25 | 36.87 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 38.98 | 36.43 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 32.26 | 36.25 |
| KXG36690 | Sorghum | nucleus | 31.18 | 36.25 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 27.15 | 36.2 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 27.15 | 36.2 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 38.71 | 36.18 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 38.71 | 36.18 |
| KXG35689 | Sorghum | nucleus, plastid | 37.9 | 36.15 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 37.63 | 35.81 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 22.58 | 35.59 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 29.84 | 35.58 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 29.57 | 35.26 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 26.88 | 34.97 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 35.22 | 34.56 |
| Os07t0617000-02 | Rice | nucleus | 31.45 | 34.21 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 33.33 | 33.88 |
| Solyc01g065980.2.1 | Tomato | nucleus | 23.12 | 33.86 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 29.3 | 33.75 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 29.3 | 33.64 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 30.65 | 33.53 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 33.6 | 33.42 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 28.49 | 33.12 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 36.02 | 32.92 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 25.54 | 32.76 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 31.45 | 32.32 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 30.91 | 32.03 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 32.53 | 31.59 |
| Zm00001d020595_P001 | Maize | nucleus | 35.22 | 31.34 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 30.65 | 31.32 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 32.53 | 31.11 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 31.72 | 30.65 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 25.54 | 28.7 |
| Zm00001d005798_P001 | Maize | nucleus | 32.53 | 28.61 |
| Solyc02g090800.1.1 | Tomato | nucleus | 9.95 | 28.24 |
| Zm00001d018305_P001 | Maize | nucleus | 20.16 | 26.6 |
| Solyc02g090770.1.1 | Tomato | nucleus | 14.25 | 26.11 |
| EES13952 | Sorghum | nucleus | 25.27 | 25.34 |
| Solyc10g050970.1.1 | Tomato | nucleus | 14.52 | 24.22 |
| Zm00001d032095_P001 | Maize | nucleus | 24.73 | 24.21 |
| Solyc02g090790.1.1 | Tomato | nucleus | 14.25 | 23.35 |
| Solyc03g118190.2.1 | Tomato | nucleus | 14.52 | 22.13 |
| Solyc04g051360.2.1 | Tomato | nucleus | 17.47 | 21.45 |
| Solyc12g042210.1.1 | Tomato | nucleus | 15.59 | 20.21 |
| Solyc12g056590.1.1 | Tomato | nucleus | 16.67 | 20.0 |
| Zm00001d047339_P001 | Maize | plastid | 23.92 | 19.73 |
| Solyc01g108240.2.1 | Tomato | nucleus | 15.05 | 18.98 |
| Solyc06g068830.1.1 | Tomato | nucleus | 13.71 | 17.65 |
| Solyc04g012050.2.1 | Tomato | nucleus | 17.2 | 16.08 |
| Solyc04g071770.2.1 | Tomato | nucleus | 18.55 | 15.27 |
| Zm00001d045386_P002 | Maize | plastid | 14.52 | 13.24 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EMBL:AY044235 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EMBL:KF926862 | EMBL:KX529479 | EMBL:KX982552 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | UniProt:Q8LGR9 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc06g063070.2 |
| EnsemblPlants:Solyc06g063070.2.1 | UniParc:UPI00000A9766 | SEG:seg | : | : | : |
Description
JERF1 [Source:UniProtKB/TrEMBL;Acc:Q8LGR9]
Coordinates
chr6:-:39817161..39819912
Molecular Weight (calculated)
41479.7 Da
IEP (calculated)
4.797
GRAVY (calculated)
-0.738
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDL VPPSRISRRL TADFLWGTSD LNKKKKNPSN YHSKPLRSKF IDLEDEFEAD FQHFKDNSDD DDDVKAFGPK SVRSGDSNCE ADRSSKRKRK
101: NQYRGIRQRP WGKWAAEIRD PRKGIRVWLG TFNSAEEAAR AYDAEARRIR GKKAKVNFPD EAPVSVSRRA IKQNPQKALR EETLNTVQPN MTYISNLDGG
201: SDDSFSFFEE KPATKQYGFE NVSFTAVDMG LGSVSPSAGT NVYFSSDEAS NTFDCSDFGW AEPCARTPEI SSVLSEVLET NETHFDDDSR PEKKLKSCSS
301: TSLTVDGNTV NTLSEELSAF ESQMKFLQIP YLEGNWDASV DAFLNTSAIQ DGGNAMDLWS FDDVPSLMGG AY
101: NQYRGIRQRP WGKWAAEIRD PRKGIRVWLG TFNSAEEAAR AYDAEARRIR GKKAKVNFPD EAPVSVSRRA IKQNPQKALR EETLNTVQPN MTYISNLDGG
201: SDDSFSFFEE KPATKQYGFE NVSFTAVDMG LGSVSPSAGT NVYFSSDEAS NTFDCSDFGW AEPCARTPEI SSVLSEVLET NETHFDDDSR PEKKLKSCSS
301: TSLTVDGNTV NTLSEELSAF ESQMKFLQIP YLEGNWDASV DAFLNTSAIQ DGGNAMDLWS FDDVPSLMGG AY
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.