Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 42.42 | 57.25 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 22.04 | 51.95 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 34.44 | 50.4 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 37.47 | 49.63 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 32.23 | 49.37 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 30.85 | 48.7 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 50.14 | 47.4 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 42.15 | 46.93 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 22.86 | 45.11 |
| GSMUA_Achr11P... | Banana | nucleus | 23.69 | 43.22 |
| GSMUA_Achr10P... | Banana | nucleus | 34.16 | 43.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.34 | 42.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.53 | 42.25 |
| KRH69017 | Soybean | nucleus | 39.94 | 42.03 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 38.02 | 41.82 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 15.98 | 41.73 |
| Solyc06g063070.2.1 | Tomato | nucleus | 39.67 | 38.71 |
| PGSC0003DMT400012547 | Potato | nucleus | 39.39 | 38.44 |
| Solyc03g123500.2.1 | Tomato | nucleus | 39.12 | 36.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.42 | 36.32 |
| PGSC0003DMT400023609 | Potato | nucleus | 38.84 | 36.15 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 15.7 | 28.93 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 14.6 | 26.77 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 17.36 | 25.61 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 15.98 | 25.11 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 15.7 | 24.26 |
| GSMUA_Achr10P... | Banana | nucleus | 14.88 | 23.79 |
| GSMUA_Achr11P... | Banana | nucleus | 15.7 | 22.27 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 14.88 | 20.38 |
| GSMUA_Achr10P... | Banana | nucleus | 16.25 | 20.07 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 15.15 | 19.78 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 15.43 | 19.24 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr7G19800_001 | EnsemblPlants:GSMUA_Achr7P19800_001 | EnsemblPlants:GSMUA_Achr7T19800_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0TJ17 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002951614 | SEG:seg |
Description
Putative Ethylene-responsive transcription factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19800_001]
Coordinates
chr7:+:22842120..22844159
Molecular Weight (calculated)
40524.8 Da
IEP (calculated)
5.928
GRAVY (calculated)
-0.628
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDY IPAGAGPLRV TTDCLWPDPN NGCGMKAGEK KKKRRRSGRG RRLPAEETDD DFEADFQEFE EDGEVDLFHI ESFALTSEDK PVPTRPSEVD
101: VPASRSAKRY RKNQYRGIRW RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDAEARK IRGKKAKLNF PDGSLPCVQK SLPKLAASRT SKTEMPNYNK
201: CFNHLYDPFQ DFCSSFDFIE VDPIIQSEKL SSFPEIKPAP PTVVAGMNLQ SDLHEIKTPE ITSVISPTIS EVEETACLEK GVAPKKLKNN VGRAVPTKES
301: AAGKPSKELS AYEPYMKFLQ ITYLQPSTDD SIDNLLGGDL TQDFSSVDLW SFDNLPQLGS SIF
101: VPASRSAKRY RKNQYRGIRW RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDAEARK IRGKKAKLNF PDGSLPCVQK SLPKLAASRT SKTEMPNYNK
201: CFNHLYDPFQ DFCSSFDFIE VDPIIQSEKL SSFPEIKPAP PTVVAGMNLQ SDLHEIKTPE ITSVISPTIS EVEETACLEK GVAPKKLKNN VGRAVPTKES
301: AAGKPSKELS AYEPYMKFLQ ITYLQPSTDD SIDNLLGGDL TQDFSSVDLW SFDNLPQLGS SIF
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.