Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g063070.2.1 | Tomato | nucleus | 93.55 | 93.55 |
| PGSC0003DMT400023609 | Potato | nucleus | 67.74 | 64.62 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 54.84 | 53.83 |
| KRH69017 | Soybean | nucleus | 48.39 | 52.17 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 36.83 | 50.0 |
| PGSC0003DMT400074248 | Potato | nucleus | 52.15 | 50.0 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 46.24 | 44.79 |
| GSMUA_Achr10P... | Banana | nucleus | 29.84 | 41.26 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 38.44 | 40.51 |
| Os06t0194000-02 | Rice | nucleus | 39.25 | 40.33 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 38.44 | 40.28 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 38.17 | 40.0 |
| PGSC0003DMT400081322 | Potato | nucleus | 29.57 | 39.57 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 38.44 | 39.39 |
| Os02t0782700-01 | Rice | nucleus | 38.17 | 38.9 |
| EER87998 | Sorghum | nucleus | 36.56 | 37.99 |
| Zm00001d052087_P001 | Maize | nucleus | 36.83 | 37.95 |
| EES07642 | Sorghum | nucleus | 37.1 | 37.5 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 36.56 | 37.47 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 39.25 | 37.44 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 37.1 | 37.4 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 27.96 | 37.28 |
| TraesCSU01G183700.1 | Wheat | nucleus | 28.23 | 36.97 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 27.69 | 36.92 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 37.37 | 36.87 |
| Os09t0434500-01 | Rice | vacuole | 39.25 | 36.87 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 38.98 | 36.43 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 38.98 | 36.43 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 37.63 | 36.27 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 37.1 | 36.22 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 38.71 | 36.18 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 27.69 | 36.01 |
| KXG36690 | Sorghum | nucleus | 30.91 | 35.94 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 37.63 | 35.81 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 31.72 | 35.65 |
| KXG35689 | Sorghum | nucleus, plastid | 37.37 | 35.64 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 29.84 | 35.58 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 22.31 | 35.17 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 29.3 | 34.94 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 31.45 | 34.41 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 34.95 | 34.3 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 29.3 | 34.06 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 29.57 | 34.06 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 34.14 | 33.96 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 29.57 | 33.95 |
| Os07t0617000-02 | Rice | nucleus | 31.18 | 33.92 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 33.33 | 33.88 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 26.08 | 33.45 |
| PGSC0003DMT400043311 | Potato | nucleus | 23.66 | 33.33 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 31.72 | 32.87 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 33.33 | 32.38 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 31.45 | 32.32 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 35.22 | 32.19 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 13.17 | 31.82 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 32.8 | 31.36 |
| Zm00001d020595_P001 | Maize | nucleus | 34.95 | 31.1 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 30.38 | 31.04 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 31.45 | 30.39 |
| PGSC0003DMT400021311 | Potato | nucleus | 12.37 | 29.68 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 26.34 | 29.61 |
| Zm00001d005798_P001 | Maize | nucleus | 31.72 | 27.9 |
| PGSC0003DMT400011537 | Potato | mitochondrion, nucleus | 13.71 | 27.27 |
| PGSC0003DMT400010296 | Potato | nucleus | 14.25 | 26.11 |
| Zm00001d018305_P001 | Maize | nucleus | 19.62 | 25.89 |
| EES13952 | Sorghum | nucleus | 24.73 | 24.8 |
| PGSC0003DMT400010297 | Potato | nucleus | 13.17 | 24.62 |
| Zm00001d032095_P001 | Maize | nucleus | 24.19 | 23.68 |
| PGSC0003DMT400065732 | Potato | nucleus | 13.44 | 21.74 |
| PGSC0003DMT400036934 | Potato | nucleus | 15.59 | 21.01 |
| Zm00001d047339_P001 | Maize | plastid | 23.66 | 19.51 |
| PGSC0003DMT400066343 | Potato | nucleus | 15.32 | 19.32 |
| PGSC0003DMT400060659 | Potato | nucleus | 17.2 | 18.88 |
| PGSC0003DMT400050718 | Potato | nucleus | 18.82 | 17.68 |
| PGSC0003DMT400048407 | Potato | nucleus | 17.74 | 16.71 |
| PGSC0003DMT400016306 | Potato | nucleus | 18.28 | 15.42 |
| Zm00001d045386_P002 | Maize | plastid | 14.25 | 12.99 |
Protein Annotations
| EntrezGene:102601077 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EMBL:KC164347 | UniProt:M1A1E2 | RefSeq:NP_001305599.1 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400004898 | PGSC:PGSC0003DMG400004898 |
| EnsemblPlants:PGSC0003DMT400012547 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0002957485 | SEG:seg | : | : | : |
Description
Transcription factor JERF1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004898]
Coordinates
chr6:+:48380518..48383025
Molecular Weight (calculated)
41508.7 Da
IEP (calculated)
4.576
GRAVY (calculated)
-0.733
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDL VPPSRISRRL TADFLWGASD LNNKKKNPSN YHSKPLRSKF IDLEDEFEAD FQHFKDYSDD DEDVKAFGSK SVRSVDSNCD ADRSSKRKRK
101: NQYRGIRQRP WGKWAAEIRD PRKGIRVWLG TFNSAEEAAR AYDVEARRIR GKKAKVNFPD EAPVSVSRRV VKQNPQEALR EETLNTVQPD MTYINNLDGG
201: SDESFSFFEE KPATKQYGYE NVCFTAGDMG LGSVSPSAGT NVYFSSDEGS NTFDCSDFGW GEPCARTPEI SSVLSEVLET NETHFDEDAR PEKKLKSCSS
301: TSLTDDGNTV NTLSEELSAF ESQMKFLQIP YLEGNGDASV DAFLNTSAIQ DGGNAMDLWF FDDVPSLMGG AY
101: NQYRGIRQRP WGKWAAEIRD PRKGIRVWLG TFNSAEEAAR AYDVEARRIR GKKAKVNFPD EAPVSVSRRV VKQNPQEALR EETLNTVQPD MTYINNLDGG
201: SDESFSFFEE KPATKQYGYE NVCFTAGDMG LGSVSPSAGT NVYFSSDEGS NTFDCSDFGW GEPCARTPEI SSVLSEVLET NETHFDEDAR PEKKLKSCSS
301: TSLTDDGNTV NTLSEELSAF ESQMKFLQIP YLEGNGDASV DAFLNTSAIQ DGGNAMDLWF FDDVPSLMGG AY
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.