Factsheet for Os06t0194000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87998	Sorghum	nucleus	63.81	64.53
Zm00001d045044_P001	Maize	nucleus, plastid	64.64	64.46
TraesCS7A01G158000.1	Wheat	nucleus	61.88	63.46
TraesCS7D01G158500.1	Wheat	nucleus	61.6	62.82
TraesCS7B01G062200.1	Wheat	nucleus	61.6	62.82
HORVU7Hr1G032750.1	Barley	nucleus, plastid	63.81	59.23
Os02t0782700-01	Rice	nucleus	58.56	58.08
Os01t0313300-01	Rice	nucleus	24.03	42.03
KRG97290	Soybean	nucleus	34.25	41.47
KRH69017	Soybean	nucleus	39.23	41.16
Solyc06g063070.2.1	Tomato	nucleus	40.61	39.52
GSMUA_Achr2P07300_001	Banana	nucleus	35.91	39.39
PGSC0003DMT400012547	Potato	nucleus	40.33	39.25
VIT_09s0002g00470.t01	Wine grape	nucleus	40.61	38.79
KRH06265	Soybean	nucleus	39.5	37.43
KRH47694	Soybean	nucleus	40.33	37.24
Os09t0434500-01	Rice	vacuole	39.78	36.36
Solyc03g123500.2.1	Tomato	nucleus	37.85	35.49
GSMUA_AchrUn_...	Banana	nucleus	36.19	35.03
PGSC0003DMT400023609	Potato	nucleus	37.57	34.87
Solyc12g049560.1.1	Tomato	nucleus	36.74	34.46
Os07t0617000-02	Rice	nucleus	31.77	33.63
PGSC0003DMT400074248	Potato	nucleus	35.91	33.51
Os05t0361700-01	Rice	nucleus	15.75	28.79
Os08t0474000-01	Rice	nucleus	14.36	23.74
Os03t0183000-02	Rice	plastid	21.27	23.05
Os04t0398000-02	Rice	nucleus	16.02	21.64
Os09t0457900-01	Rice	nucleus	16.02	21.17
Os02t0764700-01	Rice	nucleus	13.54	20.25
Os12t0168100-01	Rice	nucleus	15.47	16.42

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:4340383	ProteinID:ACU78067.1	EMBL:AK060742	EMBL:AK069833
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:BAD35280.1	ProteinID:BAD35637.1	ProteinID:BAF18958.1	ProteinID:BAS96599.1
InterPro:DNA-bd_dom_sf	EMBL:EU837257	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os06g0194000	EnsemblPlants:Os06t0194000-02	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF44	UniProt:Q69Y47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00000A63FC	RefSeq:XP_015643752.1	SEG:seg	:	:	:

Description

ETHYLENE RESPONSE FACTOR 71AP2/ERF transcription factor, Drought resistance, Control of lignin biosynthesis (Os06t0194000-01);Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3 homolog) (EREBP-5) (NtERF5). (Os06t0194000-02)

Coordinates

chr6:+:4731370..4733911

Molecular Weight (calculated)

39766.3 Da

IEP (calculated)

4.523

GRAVY (calculated)

-0.617

Length

362 amino acids

Sequence
(BLAST)

001: MCGGAILSDL IPPPRRVTAG DLWLEKTKKQ QQQKKKNKGA RRLPLRQEEE DDFEADFEEF EVDSGEWEVE SDADEAKPLA APRSGFAKGG LKNTTVAGAD
101: GPAARSAKRK RKNQFRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNSPEEA ARAYDAEARR IRGKKAKVNF PDGAPVASQR SHAEPSSMNM PAFSIEEKPA
201: VMSAGNKTMY NTNAYAYPAV EYTLQEPFVQ IQNVSFVPAM NAIEDTFVNL SSDQGSNSFG CSDFSQENDI KTPDITSMLA PTMTGVDDSA FLQNNASDAM
301: VPPVMGNASI DLADLEPYMK FLIDGGSDES IDTLLSSDGS QDVASSMDLW SFDDMPVSAE FY

Best Arabidopsis Sequence Match ( AT1G53910.1 )
(BLAST)

001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF

Arabidopsis Description

RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.