Factsheet for Os03t0183000-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0361700-01	Rice	nucleus	24.25	40.91
Os01t0313300-01	Rice	nucleus	17.96	28.99
KXG40036	Sorghum	nucleus	25.15	25.07
Zm00001d027925_P001	Maize	nucleus	24.25	23.82
Os08t0474000-01	Rice	nucleus	15.57	23.74
TraesCS4B01G299400.1	Wheat	nucleus	21.86	23.32
TraesCS4A01G005600.1	Wheat	nucleus, plastid	21.86	23.1
TraesCS4D01G298400.1	Wheat	nucleus	21.56	22.86
Os04t0398000-02	Rice	nucleus	18.26	22.76
HORVU4Hr1G077310.2	Barley	nucleus	23.05	22.51
TraesCS4B01G299500.1	Wheat	nucleus	20.96	22.15
Os02t0764700-01	Rice	nucleus	15.57	21.49
Os06t0194000-02	Rice	nucleus	23.05	21.27
Os07t0617000-02	Rice	nucleus	21.56	21.05
Os02t0782700-01	Rice	nucleus	22.75	20.82
Os09t0457900-01	Rice	nucleus	17.07	20.8
Os12t0168100-01	Rice	nucleus	18.56	18.18
Os09t0434500-01	Rice	vacuole	20.06	16.92

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	EntrezGene:4331845	ProteinID:AAK92635.1	ProteinID:ABF94329.1	ProteinID:ABF94330.1
EMBL:AK060527	EMBL:AK101949	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:BAF11091.1	ProteinID:BAS82642.1
InterPro:DNA-bd_dom_sf	EMBL:EU837258	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os03g0183000	EnsemblPlants:Os03t0183000-02	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF78	UniProt:Q10QU5	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00000AB3C7	RefSeq:XP_015630585.1	SEG:seg	:	:	:

Description

ETHYLENE RESPONSE FACTOR 62Similar to AP2 domain containing protein RAP2.6 (Fragment). (Os03t0183000-01);Similar to AP2 domain containing protein RAP2.6 (Fragment). (Os03t0183000-02);Similar to Root abundant factor. (Os03t0183000-03)

Coordinates

chr3:-:4348736..4350529

Molecular Weight (calculated)

35762.2 Da

IEP (calculated)

6.076

GRAVY (calculated)

-0.543

Length

334 amino acids

Sequence
(BLAST)

001: MCGGAILAEF IPAPSRAAAA TKRVTASHLW PAGSKNAARG KSKSKRQQRS FADVDDFEAA FEQFDDDSDF DDAEEEDEGH FVFASKSRVV AGHDGRAAAR
101: AASKKKRGRH FRGIRQRPWG KWAAEIRDPH KGTRVWLGTF NTPEEAARAY DVEARRLRGS KAKVNFPATP AAARPRRGNT RATAVPPPAT APAAAPPRGL
201: KREFSPPAET ALPFFTNGFV DLTTAAAPPP AMMMTSSFTD SVATSESGGS PAKKARSDDV DSSEGSVGGG SDTLGFTDEL EFDPFMLFQL PYSDGYESID
301: SLFAAGDANS ANTDMNAGVN LWSFDDFPID GALF

Best Arabidopsis Sequence Match ( AT1G72360.2 )
(BLAST)

001: MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP FVFSSTHKHH ASGSASDGKK KQSSRYKGIR RRPWGRWAAE IRDPIKGVRV
101: WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
201: KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS LFDGGNDMGL WS

Arabidopsis Description

HRE1Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IDA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.