Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18930_001 | Banana | nucleus | 39.73 | 62.59 |
| Zm00001d031796_P001 | Maize | nucleus | 59.36 | 48.33 |
| OQU80635 | Sorghum | nucleus | 58.9 | 44.18 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 29.22 | 41.56 |
| Bra034624.1-P | Field mustard | nucleus | 31.51 | 40.83 |
| Os09t0457900-01 | Rice | nucleus | 47.95 | 38.32 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 31.96 | 35.35 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 37.44 | 34.89 |
| PGSC0003DMT400021311 | Potato | nucleus | 23.29 | 32.9 |
| KRH50274 | Soybean | nucleus | 32.88 | 31.3 |
| Solyc10g050970.1.1 | Tomato | nucleus | 30.59 | 30.04 |
| Os02t0764700-01 | Rice | nucleus | 32.88 | 29.75 |
| KRH71142 | Soybean | nucleus | 28.77 | 29.3 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 32.42 | 28.74 |
| CDX72481 | Canola | nucleus | 33.33 | 28.29 |
| CDY46253 | Canola | nucleus | 32.88 | 27.59 |
| CDX76278 | Canola | nucleus | 33.33 | 27.55 |
| AT4G34410.1 | Thale cress | nucleus | 32.88 | 26.87 |
| CDY45310 | Canola | nucleus | 31.96 | 26.82 |
| Os05t0361700-01 | Rice | nucleus | 24.2 | 26.77 |
| Os01t0313300-01 | Rice | nucleus | 25.11 | 26.57 |
| CDX69054 | Canola | nucleus | 31.96 | 26.52 |
| CDX75430 | Canola | nucleus | 31.51 | 26.34 |
| Bra011529.1-P | Field mustard | nucleus | 31.51 | 26.34 |
| Bra017656.1-P | Field mustard | nucleus | 31.51 | 25.56 |
| CDX69056 | Canola | nucleus | 23.29 | 25.0 |
| Solyc01g108240.2.1 | Tomato | nucleus | 33.33 | 24.75 |
| PGSC0003DMT400066343 | Potato | nucleus | 32.88 | 24.41 |
| Os04t0398000-02 | Rice | nucleus | 26.48 | 21.64 |
| Os12t0168100-01 | Rice | nucleus | 27.85 | 17.89 |
| Os07t0617000-02 | Rice | nucleus | 26.48 | 16.96 |
| Os03t0183000-02 | Rice | plastid | 23.74 | 15.57 |
| Os09t0434500-01 | Rice | vacuole | 26.48 | 14.65 |
| Os06t0194000-02 | Rice | nucleus | 23.74 | 14.36 |
| Os02t0782700-01 | Rice | nucleus | 23.74 | 14.25 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:BAF23940.1 | ProteinID:BAT05865.1 |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | EnsemblPlantsGene:Os08g0474000 | EnsemblPlants:Os08t0474000-01 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | UniProt:Q0J525 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0000DD9565 |
| SEG:seg | : | : | : | : | : |
Description
ETHYLENE RESPONSE FACTOR 104Similar to AP2 domain containing protein RAP2.6 (Fragment). (Os08t0474000-01)
Coordinates
chr8:+:23353856..23354936
Molecular Weight (calculated)
24279.9 Da
IEP (calculated)
10.550
GRAVY (calculated)
-1.150
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: FKLTPRRELS SQQRENTNSH DQPDLRHGRQ PGVHDPIRRP HRRCLAELRH CRATAAAAAA GAAAGQRRRR KKKNKYRGVR QRPWGKWAAE IRDPRRAVRK
101: WLGTFDTAEE AARAYDRAAV EFRGPRAKLN FPFPEQLSAH DDSNGDASAA AKSDTLSPSP RSADADEQVE HTRWPQGGGG GGGGGGGETG DQLWEGLQDL
201: MQLDEGGLSW FPQSSDSWN
101: WLGTFDTAEE AARAYDRAAV EFRGPRAKLN FPFPEQLSAH DDSNGDASAA AKSDTLSPSP RSADADEQVE HTRWPQGGGG GGGGGGGETG DQLWEGLQDL
201: MQLDEGGLSW FPQSSDSWN
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.