Factsheet for Solyc10g050970.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021311	Potato	nucleus	53.81	77.42
PGSC0003DMT400021312	Potato	nucleus, plastid	52.91	76.62
GSMUA_Achr7P18930_001	Banana	nucleus	28.7	46.04
Solyc01g108240.2.1	Tomato	nucleus	57.85	43.73
KRH50274	Soybean	nucleus	43.5	42.17
VIT_03s0063g00460.t01	Wine grape	nucleus	44.84	40.49
KRH71142	Soybean	nucleus	38.56	40.0
Bra034624.1-P	Field mustard	nucleus	30.04	39.65
GSMUA_Achr6P02310_001	Banana	nucleus	34.08	38.38
Solyc02g090800.1.1	Tomato	nucleus	21.52	36.64
CDX72481	Canola	nucleus	41.26	35.66
CDY45310	Canola	nucleus	41.7	35.63
GSMUA_Achr3P06960_001	Banana	nucleus	37.22	35.32
Bra011529.1-P	Field mustard	nucleus	40.81	34.73
CDX75430	Canola	nucleus	40.81	34.73
CDX76278	Canola	nucleus	40.81	34.34
CDY46253	Canola	nucleus	39.91	34.1
Bra017656.1-P	Field mustard	nucleus	41.26	34.07
AT4G34410.1	Thale cress	nucleus	40.81	33.96
TraesCS5B01G236900.1	Wheat	nucleus	36.77	33.88
CDX69054	Canola	nucleus	39.91	33.71
TraesCS5A01G238400.1	Wheat	nucleus	36.32	33.61
TraesCS1D01G376800.1	Wheat	nucleus	39.46	32.96
HORVU1Hr1G082310.1	Barley	nucleus	39.01	32.95
TraesCS1A01G370700.1	Wheat	nucleus	39.01	32.83
TraesCS1B01G389800.1	Wheat	nucleus	38.12	32.82
TraesCS1A01G370600.1	Wheat	nucleus	37.67	32.81
TraesCS1B01G389700.1	Wheat	nucleus	36.77	32.67
TraesCS5D01G245300.1	Wheat	nucleus	35.87	32.52
TraesCS1A01G370400.1	Wheat	nucleus	37.67	32.31
TraesCS1B01G389900.1	Wheat	nucleus	38.56	32.21
Solyc02g090770.1.1	Tomato	nucleus	29.15	32.02
TraesCS1D01G376500.1	Wheat	nucleus	38.12	31.37
TraesCS1D01G376600.1	Wheat	nucleus	37.22	31.32
TraesCS1D01G376700.1	Wheat	nucleus	37.22	31.2
Os08t0474000-01	Rice	nucleus	30.04	30.59
CDX69056	Canola	nucleus	27.8	30.39
Zm00001d031796_P001	Maize	nucleus	35.87	29.74
HORVU5Hr1G068450.1	Barley	nucleus	35.43	29.48
Zm00001d005892_P001	Maize	nucleus	34.08	28.9
Os09t0457900-01	Rice	nucleus	35.43	28.83
Solyc02g090790.1.1	Tomato	nucleus	29.15	28.63
EER96855	Sorghum	mitochondrion, nucleus	37.22	28.23
OQU80635	Sorghum	nucleus	34.98	26.71
Solyc03g118190.2.1	Tomato	nucleus	24.22	22.13
Solyc04g051360.2.1	Tomato	nucleus	30.04	22.11
Solyc12g056590.1.1	Tomato	nucleus	30.49	21.94
Solyc01g065980.2.1	Tomato	nucleus	23.32	20.47
Solyc09g075420.2.1	Tomato	nucleus	23.32	20.0
Solyc12g042210.1.1	Tomato	nucleus	25.56	19.86
Solyc06g068830.1.1	Tomato	nucleus	25.11	19.38
Solyc04g012050.2.1	Tomato	nucleus	29.6	16.58
Solyc04g071770.2.1	Tomato	nucleus	31.84	15.71
Solyc06g063070.2.1	Tomato	nucleus	24.22	14.52
Solyc03g123500.2.1	Tomato	nucleus	22.87	13.21
Solyc12g049560.1.1	Tomato	nucleus	21.08	12.18

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001471
InterPro:IPR036955	UniProt:K4D0Q1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF62	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc10g050970.1	EnsemblPlants:Solyc10g050970.1.1	TMHMM:TMhelix
UniParc:UPI000276A560	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:51274679..51275350

Molecular Weight (calculated)

25081.5 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.624

Length

223 amino acids

Sequence
(BLAST)

001: MQRSTKLSGE EEFSIMVAAL TNVITGAATI SSFPCTSGMS PPLFRVPEET ERCQYCKING CLGCNYFATS SAAAGVVNNN KALKIVGKTK KKKKNYRGVR
101: QRPWGKWAAE IRDPRRAARV WLGTFTTAED AARAYDRAAI EFRGPRAKLN FSFTDYTSIQ QHNTTTPMQV LQQQQPAPSQ LQQGINTEEE EFWDQLMNSD
201: NEIQHYLYRE SSDSANGYIA HSF

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.