Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G245300.1 | Wheat | nucleus | 93.78 | 91.87 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 91.7 | 91.32 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 86.31 | 77.61 |
| Os09t0457900-01 | Rice | nucleus | 66.39 | 58.39 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 31.12 | 53.96 |
| Zm00001d031796_P001 | Maize | nucleus | 55.6 | 49.81 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 52.28 | 47.55 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 38.59 | 46.97 |
| OQU80635 | Sorghum | nucleus | 54.36 | 44.86 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 47.72 | 44.23 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 42.74 | 43.83 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 46.47 | 43.75 |
| PGSC0003DMT400021311 | Potato | nucleus | 27.8 | 43.23 |
| TraesCS6A01G319500.1 | Wheat | nucleus | 32.78 | 42.02 |
| TraesCS6A01G319600.1 | Wheat | nucleus | 41.49 | 40.49 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 25.73 | 40.26 |
| KRH50274 | Soybean | nucleus | 36.93 | 38.7 |
| Solyc10g050970.1.1 | Tomato | nucleus | 33.61 | 36.32 |
| Bra034624.1-P | Field mustard | nucleus | 25.31 | 36.09 |
| KRH71142 | Soybean | nucleus | 31.95 | 35.81 |
| CDX72481 | Canola | nucleus | 36.93 | 34.5 |
| CDY46253 | Canola | nucleus | 37.34 | 34.48 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 34.85 | 34.01 |
| CDX76278 | Canola | nucleus | 36.93 | 33.58 |
| CDY45310 | Canola | nucleus | 36.1 | 33.33 |
| Bra011529.1-P | Field mustard | nucleus | 34.85 | 32.06 |
| CDX75430 | Canola | nucleus | 34.85 | 32.06 |
| Bra017656.1-P | Field mustard | nucleus | 35.68 | 31.85 |
| CDX69054 | Canola | nucleus | 34.85 | 31.82 |
| AT4G34410.1 | Thale cress | nucleus | 34.85 | 31.34 |
| CDX69056 | Canola | nucleus | 24.07 | 28.43 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 20.75 | 27.78 |
| TraesCS7A01G264100.1 | Wheat | plastid | 25.73 | 27.31 |
| Solyc01g108240.2.1 | Tomato | nucleus | 33.2 | 27.12 |
| PGSC0003DMT400066343 | Potato | nucleus | 32.78 | 26.78 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 21.99 | 25.98 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 23.65 | 22.71 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 28.63 | 21.04 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 26.56 | 16.98 |
| TraesCS4A01G005600.1 | Wheat | nucleus, plastid | 21.99 | 16.77 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 21.99 | 15.01 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 20.33 | 14.41 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 21.16 | 14.09 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 23.24 | 14.07 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 21.16 | 14.01 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5A01G238400 | EnsemblPlants:TraesCS5A01G238400.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:+:454732689..454733414
Molecular Weight (calculated)
25373.6 Da
IEP (calculated)
7.074
GRAVY (calculated)
-0.452
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MATANQDCAA TLHDHRGGTA ATGLHGRTIS SEQEHGIIVA ALRHVVSGYT TAPPEVVVAV ACGRCGIDGC LGCDFFGAAE PEAAAAAVPA GGVQRKRRRK
101: KNVYRGVRQR PWGKWAAEIR DPRRAVRKWL GTFDTAEEAA RAYDLAALEF RGPRARLNFP CSDGPLREHG SGNGGDGDAG AAPQNETLAT PSPCSTDAGQ
201: RTPGEWQLGA GGAGDQLWKG LQDLMTIDGE DPWFAPFSSP A
101: KNVYRGVRQR PWGKWAAEIR DPRRAVRKWL GTFDTAEEAA RAYDLAALEF RGPRARLNFP CSDGPLREHG SGNGGDGDAG AAPQNETLAT PSPCSTDAGQ
201: RTPGEWQLGA GGAGDQLWKG LQDLMTIDGE DPWFAPFSSP A
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.