Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75430 | Canola | nucleus | 89.02 | 89.69 |
| CDX69056 | Canola | nucleus | 65.15 | 84.31 |
| CDX72481 | Canola | nucleus | 76.14 | 77.91 |
| CDY45310 | Canola | nucleus | 75.38 | 76.25 |
| AT4G34410.1 | Thale cress | nucleus | 76.89 | 75.75 |
| CDX76278 | Canola | nucleus | 75.0 | 74.72 |
| CDY46253 | Canola | nucleus | 73.11 | 73.95 |
| PGSC0003DMT400021311 | Potato | nucleus | 28.41 | 48.39 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 27.27 | 46.75 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 21.97 | 41.73 |
| KRH50274 | Soybean | nucleus | 35.98 | 41.3 |
| KRH71142 | Soybean | nucleus | 32.58 | 40.0 |
| Solyc10g050970.1.1 | Tomato | nucleus | 33.71 | 39.91 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 37.12 | 39.68 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 29.55 | 39.39 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 33.71 | 37.87 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 34.47 | 36.26 |
| Solyc01g108240.2.1 | Tomato | nucleus | 39.77 | 35.59 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 32.58 | 35.54 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 34.85 | 35.52 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 35.61 | 35.47 |
| PGSC0003DMT400066343 | Potato | nucleus | 39.39 | 35.25 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 35.61 | 35.21 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 35.61 | 35.21 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 31.82 | 34.85 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 33.71 | 34.77 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 34.47 | 34.34 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 31.44 | 33.74 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 32.95 | 33.46 |
| Zm00001d031796_P001 | Maize | nucleus | 33.71 | 33.09 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 32.95 | 32.71 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 32.58 | 32.58 |
| Os08t0474000-01 | Rice | nucleus | 26.52 | 31.96 |
| CDY37698 | Canola | mitochondrion | 20.08 | 31.36 |
| Os09t0457900-01 | Rice | nucleus | 32.2 | 31.02 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 31.44 | 30.97 |
| Zm00001d005892_P001 | Maize | nucleus | 30.68 | 30.8 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 31.44 | 30.63 |
| OQU80635 | Sorghum | nucleus | 33.71 | 30.48 |
| EER96855 | Sorghum | mitochondrion, nucleus | 33.71 | 30.27 |
| CDY17191 | Canola | nucleus | 22.35 | 27.31 |
| CDY53788 | Canola | golgi | 20.08 | 27.04 |
| CDY27480 | Canola | nucleus | 19.7 | 26.94 |
| CDY27952 | Canola | nucleus | 21.97 | 26.85 |
| CDY51428 | Canola | nucleus | 19.7 | 26.53 |
| CDX69647 | Canola | nucleus | 20.83 | 25.35 |
| CDY53152 | Canola | nucleus | 21.59 | 25.22 |
| CDY09787 | Canola | nucleus | 21.21 | 25.11 |
| CDX78517 | Canola | nucleus | 22.73 | 23.26 |
| CDY34977 | Canola | nucleus | 21.21 | 23.24 |
| CDX92094 | Canola | nucleus | 21.21 | 23.14 |
| CDX78288 | Canola | nucleus | 22.35 | 23.14 |
| CDY14051 | Canola | nucleus | 22.35 | 23.05 |
| CDX85656 | Canola | nucleus | 21.59 | 22.89 |
| CDX72909 | Canola | nucleus | 16.29 | 22.87 |
| CDX70498 | Canola | nucleus | 22.35 | 22.87 |
| CDY55173 | Canola | nucleus | 21.97 | 22.75 |
| CDY28337 | Canola | nucleus | 20.83 | 22.63 |
| CDX95906 | Canola | nucleus | 20.83 | 22.54 |
| CDX98982 | Canola | nucleus | 21.59 | 22.53 |
| CDX70027 | Canola | nucleus | 21.59 | 22.53 |
| CDX91131 | Canola | nucleus | 21.59 | 22.44 |
| CDX68269 | Canola | nucleus | 18.18 | 21.72 |
| CDY54628 | Canola | nucleus | 20.08 | 21.63 |
| CDX82392 | Canola | nucleus | 20.08 | 21.63 |
| CDY50643 | Canola | nucleus | 17.8 | 20.7 |
| CDY31304 | Canola | nucleus | 28.03 | 19.42 |
| CDY46821 | Canola | nucleus | 27.65 | 19.11 |
| CDY14506 | Canola | nucleus | 27.27 | 18.37 |
| CDY08853 | Canola | nucleus | 27.27 | 18.23 |
| CDX81250 | Canola | nucleus | 27.27 | 17.87 |
| CDX96402 | Canola | nucleus | 16.67 | 17.6 |
| CDX75756 | Canola | nucleus | 20.08 | 15.23 |
| CDX82492 | Canola | nucleus | 20.08 | 15.06 |
| CDY02492 | Canola | nucleus | 16.29 | 14.05 |
| CDX98435 | Canola | nucleus | 19.7 | 13.72 |
| CDY25681 | Canola | nucleus | 15.91 | 13.68 |
| CDY39107 | Canola | nucleus | 19.7 | 13.33 |
| CDY65334 | Canola | nucleus | 19.32 | 13.32 |
| CDX97559 | Canola | nucleus | 20.08 | 12.41 |
| CDY71587 | Canola | cytosol | 3.03 | 11.59 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078BYR3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX69054 |
| ProteinID:CDX69054 | ProteinID:CDX69054.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00130821001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EED107 | SEG:seg | : | : | : | : |
Description
BnaC01g03990D
Coordinates
chrLK031789:+:2673434..2674252
Molecular Weight (calculated)
28696.9 Da
IEP (calculated)
4.786
GRAVY (calculated)
-0.637
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYPNNRPEL SSGAPSRDRD STRYPYHNQE QLSPEQELSV IVSALQHVIS GENETAPYQG FSSTVISAGM PPSDSDACQV CRIDGCLGCN YFFAPNQTIE
101: NTHQQVEVSS RRESHVAAAK KAAEGGGKNG YRGVRQRPWG KFAAEIRDPK RATRVWLGTF ETAEDAARAY DRAAIGFRGP RAKLNFPFAD YTSSASSPVG
201: AEDVVTSASA SANASTSVSA TESAEAEQWR GDCDMDEYLK MMMMMDFGNG DSSDSGNTIA DMFQ
101: NTHQQVEVSS RRESHVAAAK KAAEGGGKNG YRGVRQRPWG KFAAEIRDPK RATRVWLGTF ETAEDAARAY DRAAIGFRGP RAKLNFPFAD YTSSASSPVG
201: AEDVVTSASA SANASTSVSA TESAEAEQWR GDCDMDEYLK MMMMMDFGNG DSSDSGNTIA DMFQ
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.