Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001541.1-P | Field mustard | nucleus | 95.17 | 95.17 |
| CDX75756 | Canola | nucleus | 90.06 | 91.09 |
| CDX98435 | Canola | nucleus | 76.99 | 71.5 |
| AT3G14230.1 | Thale cress | nucleus | 74.72 | 69.39 |
| CDY39107 | Canola | nucleus | 75.57 | 68.21 |
| CDY65334 | Canola | nucleus | 73.86 | 67.89 |
| CDX97559 | Canola | nucleus | 78.41 | 64.64 |
| CDY25681 | Canola | nucleus | 56.25 | 64.5 |
| CDY02492 | Canola | nucleus | 55.68 | 64.05 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 24.43 | 42.16 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 23.58 | 41.92 |
| CDY27480 | Canola | nucleus | 22.73 | 41.45 |
| CDY51428 | Canola | nucleus | 23.01 | 41.33 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 23.86 | 40.0 |
| Os01t0313300-01 | Rice | nucleus | 23.01 | 39.13 |
| CDX72909 | Canola | nucleus | 20.17 | 37.77 |
| CDX68269 | Canola | nucleus | 23.58 | 37.56 |
| EES00666 | Sorghum | nucleus | 23.3 | 36.12 |
| CDY50643 | Canola | nucleus | 23.01 | 35.68 |
| Zm00001d009103_P001 | Maize | nucleus | 23.01 | 35.22 |
| Zm00001d040651_P001 | Maize | nucleus | 23.01 | 34.18 |
| CDY34977 | Canola | nucleus | 23.01 | 33.61 |
| CDY37698 | Canola | mitochondrion | 15.91 | 33.14 |
| CDY28337 | Canola | nucleus | 22.73 | 32.92 |
| CDX96402 | Canola | nucleus | 23.3 | 32.8 |
| CDY54628 | Canola | nucleus | 22.73 | 32.65 |
| CDX95906 | Canola | nucleus | 22.44 | 32.38 |
| CDX82392 | Canola | nucleus | 22.44 | 32.24 |
| CDX92094 | Canola | nucleus | 22.16 | 32.23 |
| CDY53788 | Canola | golgi | 15.62 | 28.06 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 23.58 | 27.76 |
| CDY17191 | Canola | nucleus | 16.48 | 26.85 |
| CDY27952 | Canola | nucleus | 16.48 | 26.85 |
| CDX69647 | Canola | nucleus | 14.77 | 23.96 |
| CDY09787 | Canola | nucleus | 14.77 | 23.32 |
| CDY14051 | Canola | nucleus | 16.76 | 23.05 |
| CDX98982 | Canola | nucleus | 16.48 | 22.92 |
| CDX70027 | Canola | nucleus | 16.48 | 22.92 |
| CDY55173 | Canola | nucleus | 16.48 | 22.75 |
| Zm00001d007033_P001 | Maize | plastid | 18.18 | 22.54 |
| CDX78288 | Canola | nucleus | 16.19 | 22.35 |
| CDY53152 | Canola | nucleus | 14.2 | 22.12 |
| CDX78517 | Canola | nucleus | 16.19 | 22.09 |
| CDX70498 | Canola | nucleus | 16.19 | 22.09 |
| CDX85656 | Canola | nucleus | 15.62 | 22.09 |
| CDX91131 | Canola | nucleus | 15.62 | 21.65 |
| CDY31304 | Canola | nucleus | 22.44 | 20.73 |
| CDX75430 | Canola | nucleus | 15.34 | 20.61 |
| CDY46821 | Canola | nucleus | 22.16 | 20.42 |
| CDX76278 | Canola | nucleus | 15.34 | 20.38 |
| CDY45310 | Canola | nucleus | 15.06 | 20.31 |
| CDX69054 | Canola | nucleus | 15.06 | 20.08 |
| CDY46253 | Canola | nucleus | 14.77 | 19.92 |
| CDY14506 | Canola | nucleus | 22.16 | 19.9 |
| CDX72481 | Canola | nucleus | 14.49 | 19.77 |
| CDY08853 | Canola | nucleus | 21.59 | 19.24 |
| CDX81250 | Canola | nucleus | 20.45 | 17.87 |
| CDX69056 | Canola | nucleus | 9.94 | 17.16 |
| CDY71587 | Canola | cytosol | 0.57 | 2.9 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078D030 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX82492 |
| ProteinID:CDX82492 | ProteinID:CDX82492.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137635001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0001890C01 | SEG:seg | : | : | : | : |
Description
BnaA03g33290D
Coordinates
chrLK031828:+:1572235..1574267
Molecular Weight (calculated)
39339.5 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.731
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISEF IPPPKSRRVT SEFIWPDLKN LKKKSRKRSH FFDLDNEFEA DFKGFKDDDS SFECEDGFDV KPFAFTAATK PVASLPTNVA TTGSVSDKKA
101: VESDEKSGKR KRKNQYRGIR LRPWGKWAAE IRDPKKGSRE WLGTFETAEE AARAYDAAAR RIRGDKAKVN FPEEVISSPK KPVAKPNQTP ALVQQPTHVS
201: QYCNNSFDNM GHDSLSFMEE KPRVYNNQFF DVGQYFGSDQ GSNSFDCSEF GWSDHAPKTP PENSSMVVNN NQATFAEETI AAKKVKLSSE DETSDNDDLM
301: AYLDNALWES PLEVEAMLGV DAAAAAGVAQ EEANPMELWS LDDINFMLDG DF
101: VESDEKSGKR KRKNQYRGIR LRPWGKWAAE IRDPKKGSRE WLGTFETAEE AARAYDAAAR RIRGDKAKVN FPEEVISSPK KPVAKPNQTP ALVQQPTHVS
201: QYCNNSFDNM GHDSLSFMEE KPRVYNNQFF DVGQYFGSDQ GSNSFDCSEF GWSDHAPKTP PENSSMVVNN NQATFAEETI AAKKVKLSSE DETSDNDDLM
301: AYLDNALWES PLEVEAMLGV DAAAAAGVAQ EEANPMELWS LDDINFMLDG DF
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTVGSA
101: YAKKTVESAE QAEKSSKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGTKAKVNFP EEKNPSVVSQ KRPSAKTNNL
201: QKSVAKPNKS VTLVQQPTHL SQQYCNNSFD NSFGDMSFME EKPQMYNNQF GLTNSFDAGG NNGYQYFSSD QGSNSFDCSE FGWSDHGPKT PEISSMLVNN
301: NEASFVEETN AAKKLKPNSD ESDDLMAYLD NALWDTPLEV EAMLGADAGA VTQEEENPVE LWSLDEINFM LEGDF
101: YAKKTVESAE QAEKSSKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGTKAKVNFP EEKNPSVVSQ KRPSAKTNNL
201: QKSVAKPNKS VTLVQQPTHL SQQYCNNSFD NSFGDMSFME EKPQMYNNQF GLTNSFDAGG NNGYQYFSSD QGSNSFDCSE FGWSDHGPKT PEISSMLVNN
301: NEASFVEETN AAKKLKPNSD ESDDLMAYLD NALWDTPLEV EAMLGADAGA VTQEEENPVE LWSLDEINFM LEGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.