Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53910.1 | EER95181 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | OQU80721 | AT2G44040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009103_P001 | Maize | nucleus | 87.22 | 86.09 |
| Zm00001d040651_P001 | Maize | nucleus | 88.55 | 84.81 |
| Os01t0313300-01 | Rice | nucleus | 67.4 | 73.91 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 61.67 | 70.71 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 62.11 | 69.12 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 63.0 | 68.1 |
| Zm00001d007033_P001 | Maize | plastid | 73.57 | 58.8 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 63.44 | 48.16 |
| EES18078 | Sorghum | nucleus | 24.67 | 28.14 |
| KXG36690 | Sorghum | nucleus | 35.24 | 25.0 |
| EER97023 | Sorghum | nucleus | 24.67 | 24.67 |
| EER87998 | Sorghum | nucleus | 38.77 | 24.58 |
| KXG40036 | Sorghum | nucleus | 35.68 | 24.18 |
| Bra021543.1-P | Field mustard | nucleus | 38.77 | 24.11 |
| CDX75756 | Canola | nucleus | 36.56 | 23.85 |
| EES07642 | Sorghum | nucleus | 37.89 | 23.37 |
| Bra001541.1-P | Field mustard | nucleus | 36.12 | 23.3 |
| CDX82492 | Canola | nucleus | 36.12 | 23.3 |
| CDX98435 | Canola | nucleus | 38.77 | 23.22 |
| Bra027355.1-P | Field mustard | nucleus | 38.77 | 23.22 |
| CDY65334 | Canola | nucleus | 38.77 | 22.98 |
| CDY02492 | Canola | nucleus | 30.84 | 22.88 |
| Bra030919.1-P | Field mustard | nucleus | 30.84 | 22.88 |
| CDY25681 | Canola | nucleus | 30.84 | 22.8 |
| AT3G14230.1 | Thale cress | nucleus | 37.89 | 22.69 |
| CDY39107 | Canola | nucleus | 38.77 | 22.56 |
| KXG31168 | Sorghum | nucleus | 24.23 | 22.09 |
| AT1G53910.1 | Thale cress | nucleus | 34.8 | 22.07 |
| KXG35689 | Sorghum | nucleus, plastid | 37.0 | 21.54 |
| EER96855 | Sorghum | mitochondrion, nucleus | 26.87 | 20.75 |
| CDX97559 | Canola | nucleus | 38.77 | 20.61 |
| OQU80635 | Sorghum | nucleus | 25.55 | 19.86 |
| EES13952 | Sorghum | nucleus | 31.72 | 19.41 |
| OQU80805 | Sorghum | nucleus | 24.23 | 18.27 |
| OQU82952 | Sorghum | mitochondrion | 24.67 | 17.02 |
| OQU85019 | Sorghum | nucleus | 21.59 | 16.78 |
| OQU78803 | Sorghum | nucleus | 24.67 | 16.42 |
| OQU81440 | Sorghum | nucleus | 25.11 | 11.49 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:8060355 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | UniProt:C5XIU7 |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | EnsemblPlants:EES00666 | ProteinID:EES00666 | ProteinID:EES00666.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3003G148600 |
| SUPFAM:SSF54171 | unigene:Sbi.17028 | UniParc:UPI0001A844BE | RefSeq:XP_002455546.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:15554020..15555301
Molecular Weight (calculated)
24223.4 Da
IEP (calculated)
8.861
GRAVY (calculated)
-0.360
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIFDY IPAARRRLSS AADFWPGSDA DAEDSHASLT PAPERAPRAK KAKRGRKNQY RGIRQRPWGK WAAEIRDPVK GVRVWLGTYP TAEAAARAYD
101: RAARRIRGAK AKVNFPNDTS SSVTAVPTTA AGAAAAQAPA VLPAPKVEAQ AQVSDEVKEL SEELMAYENY MNFLGIPYME GGNAAAGATT AAAAATVAEE
201: AQVPAAPAGL WSFEDYYYPP SLSLFTE
101: RAARRIRGAK AKVNFPNDTS SSVTAVPTTA AGAAAAQAPA VLPAPKVEAQ AQVSDEVKEL SEELMAYENY MNFLGIPYME GGNAAAGATT AAAAATVAEE
201: AQVPAAPAGL WSFEDYYYPP SLSLFTE
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.