Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G021120.1 | |
| HORVU4Hr1G063600.3 | |
| HORVU4Hr1G073970.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53910.1 | HORVU1Hr1G021120.1 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | HORVU4Hr1G063600.3 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | HORVU4Hr1G073970.1 | AT2G44040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G320800.1 | Wheat | nucleus | 60.87 | 91.92 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 63.55 | 90.48 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 60.87 | 89.22 |
| Os01t0313300-01 | Rice | nucleus | 49.5 | 71.5 |
| EES00666 | Sorghum | nucleus | 48.16 | 63.44 |
| Zm00001d009103_P001 | Maize | nucleus | 47.49 | 61.74 |
| Zm00001d040651_P001 | Maize | nucleus | 48.16 | 60.76 |
| Zm00001d007033_P001 | Maize | plastid | 43.48 | 45.77 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 18.73 | 30.11 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 16.39 | 27.68 |
| Bra021543.1-P | Field mustard | nucleus | 30.1 | 24.66 |
| CDY02492 | Canola | nucleus | 24.75 | 24.18 |
| Bra030919.1-P | Field mustard | nucleus | 24.75 | 24.18 |
| Bra001541.1-P | Field mustard | nucleus | 28.43 | 24.15 |
| CDX75756 | Canola | nucleus | 28.09 | 24.14 |
| CDY25681 | Canola | nucleus | 24.75 | 24.1 |
| CDX82492 | Canola | nucleus | 27.76 | 23.58 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 29.1 | 23.58 |
| CDY65334 | Canola | nucleus | 30.1 | 23.5 |
| CDX98435 | Canola | nucleus | 29.77 | 23.48 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 22.41 | 23.43 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 30.43 | 23.33 |
| Bra027355.1-P | Field mustard | nucleus | 29.43 | 23.22 |
| CDY39107 | Canola | nucleus | 30.1 | 23.08 |
| AT1G53910.1 | Thale cress | nucleus | 27.42 | 22.91 |
| AT3G14230.1 | Thale cress | nucleus | 28.76 | 22.69 |
| HORVU6Hr1G078520.1 | Barley | nucleus | 14.05 | 22.46 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 30.43 | 22.36 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 19.73 | 22.35 |
| HORVU4Hr1G077310.2 | Barley | nucleus | 24.08 | 21.05 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 27.42 | 20.97 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 18.73 | 20.9 |
| CDX97559 | Canola | nucleus | 29.43 | 20.61 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 25.75 | 20.59 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 20.07 | 19.11 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 20.4 | 18.89 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 20.07 | 18.75 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 19.06 | 18.27 |
| HORVU6Hr1G083530.1 | Barley | nucleus | 23.75 | 17.93 |
| HORVU6Hr1G082820.1 | Barley | nucleus | 24.08 | 17.82 |
| HORVU6Hr1G082770.1 | Barley | nucleus | 22.41 | 17.22 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 16.05 | 16.55 |
| HORVU6Hr1G078510.5 | Barley | nucleus | 13.71 | 15.95 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A287RZD3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G080790 |
| EnsemblPlants:HORVU5Hr1G080790.1 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B46F3A5 | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:562157978..562159066
Molecular Weight (calculated)
31869.0 Da
IEP (calculated)
9.151
GRAVY (calculated)
-0.299
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: FLDPFPGGWP PQCRPVHKHR GGGLIIPSNP IQRPSAAENT LPSPKPFPPP KAPEVTIHPI SMCGGAIIYD YIPAAAHRRR ASTADFWPDA YSAAPDKGTC
101: ALTVFPSGFG NGRPCAGAGL ADRRALVVLA APRAKRGRKN QYRGIRQRPW GKWAAEIRDP VKGVRVWLGT YPTAEAAARA YDRAARRIRG AKAKVNFPNE
201: ILAGAPAHQA SCTMAAAPPP AVLPSPKKEE GVEPAAPCSC EEVKALSEEL MAYESYMSFL GVPYMEGGAA AAVGAAAEEA PAELWSFEDS YYYPGPLGL
101: ALTVFPSGFG NGRPCAGAGL ADRRALVVLA APRAKRGRKN QYRGIRQRPW GKWAAEIRDP VKGVRVWLGT YPTAEAAARA YDRAARRIRG AKAKVNFPNE
201: ILAGAPAHQA SCTMAAAPPP AVLPSPKKEE GVEPAAPCSC EEVKALSEEL MAYESYMSFL GVPYMEGGAA AAVGAAAEEA PAELWSFEDS YYYPGPLGL
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.