Factsheet for HORVU6Hr1G082820.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G083530.1	Barley	nucleus	89.36	91.16
HORVU6Hr1G082770.1	Barley	nucleus	82.43	85.6
HORVU6Hr1G076090.2	Barley	nucleus	53.22	67.19
HORVU6Hr1G082880.1	Barley	nucleus	49.75	54.47
HORVU0Hr1G021820.1	Barley	nucleus	36.63	51.75
HORVU6Hr1G017530.1	Barley	nucleus	47.77	49.36
HORVU6Hr1G064370.1	Barley	nucleus	35.4	49.31
HORVU7Hr1G090440.1	Barley	nucleus	45.05	48.66
HORVU6Hr1G083520.2	Barley	nucleus, plastid	38.86	48.61
HORVU6Hr1G082840.1	Barley	nucleus	36.88	47.76
HORVU7Hr1G032750.1	Barley	nucleus, plastid	34.65	35.9
HORVU2Hr1G071270.4	Barley	nucleus	12.87	29.38
HORVU1Hr1G058940.4	Barley	nucleus, plastid	12.87	27.96
HORVU5Hr1G080790.1	Barley	nucleus	17.82	24.08
HORVU6Hr1G078520.1	Barley	nucleus	11.14	24.06
HORVU4Hr1G077310.2	Barley	nucleus	20.3	23.98
HORVU5Hr1G062940.1	Barley	nucleus, plastid	24.01	23.83
HORVU5Hr1G068450.1	Barley	nucleus	14.11	21.27
HORVU1Hr1G082310.1	Barley	nucleus	12.87	19.7
HORVU5Hr1G036590.2	Barley	nucleus	14.11	18.15
HORVU6Hr1G078510.5	Barley	nucleus	10.89	17.12

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A287UXT7	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G082820	EnsemblPlants:HORVU6Hr1G082820.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF44	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B4807DA	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:549583705..549589117

Molecular Weight (calculated)

45558.8 Da

IEP (calculated)

8.625

GRAVY (calculated)

-0.563

Length

404 amino acids

Sequence
(BLAST)

001: NCPRPHLPTT HPLPRFTKNF AKLPIPARFL FPNDYDEALA VICRGVVVEN IKTLVVAEVV SWLEKKRSRD ELHFLRLIKF GIGLEMENEW EEFQVNSTDS
101: DLELGHDGVV EEDYNDDVFE IKPFVSISRS LSKDDLSTMP TAGFDGPAQR SAKRKRKTHY RGIRQRPWGK WAAEIRDPIK GVRVWLGTFN SAEEAARAYD
201: VAARRIRSKK AKLNFPEDGT FAQNSRAPRA ATKVPKPRAS QEHSFVPADN NLANRNSFVY PSGSFASKHP VVQRDHVSFP HAMSSVATVE APVTNMYSDR
301: TYHPHQGWDY HTKAPHIAST TRISTIAEGD GSLHVKNDTN NLMVPHVMEN NAAKFEPWMR YLMDNSVDEM IDSLLNFDVP QDAVGNISEG TKPSISGKRV
401: SLPI

Best Arabidopsis Sequence Match ( AT2G47520.1 )
(BLAST)

001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N

Arabidopsis Description

ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.