Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G320800.1 | Wheat | nucleus | 90.95 | 96.46 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 90.0 | 92.65 |
| Os01t0313300-01 | Rice | nucleus | 71.43 | 72.46 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 90.48 | 63.55 |
| EES00666 | Sorghum | nucleus | 68.1 | 63.0 |
| Zm00001d009103_P001 | Maize | nucleus | 67.62 | 61.74 |
| Zm00001d040651_P001 | Maize | nucleus | 69.05 | 61.18 |
| Zm00001d007033_P001 | Maize | plastid | 58.1 | 42.96 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 32.38 | 28.81 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 25.24 | 28.65 |
| CDX75756 | Canola | nucleus | 40.95 | 24.71 |
| Bra021543.1-P | Field mustard | nucleus | 42.86 | 24.66 |
| Bra001541.1-P | Field mustard | nucleus | 40.95 | 24.43 |
| CDY02492 | Canola | nucleus | 35.24 | 24.18 |
| Bra030919.1-P | Field mustard | nucleus | 35.24 | 24.18 |
| CDY25681 | Canola | nucleus | 35.24 | 24.1 |
| CDX82492 | Canola | nucleus | 40.0 | 23.86 |
| CDY65334 | Canola | nucleus | 42.86 | 23.5 |
| CDX98435 | Canola | nucleus | 42.38 | 23.48 |
| Bra027355.1-P | Field mustard | nucleus | 42.38 | 23.48 |
| TraesCS4B01G299400.1 | Wheat | nucleus | 34.76 | 23.32 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 39.05 | 23.1 |
| CDY39107 | Canola | nucleus | 42.86 | 23.08 |
| AT3G14230.1 | Thale cress | nucleus | 41.43 | 22.96 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 20.48 | 22.87 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 27.14 | 22.71 |
| AT1G53910.1 | Thale cress | nucleus | 38.57 | 22.63 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 20.0 | 22.46 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 27.62 | 22.39 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 25.24 | 21.9 |
| TraesCS7B01G162100.1 | Wheat | plastid | 23.33 | 21.88 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 29.05 | 21.86 |
| TraesCS4B01G299500.1 | Wheat | nucleus | 32.38 | 21.52 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 39.52 | 21.5 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 40.0 | 21.11 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 26.67 | 20.97 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 25.24 | 20.95 |
| CDX97559 | Canola | nucleus | 42.38 | 20.84 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 24.76 | 20.55 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 30.48 | 20.51 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 34.76 | 19.95 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 34.29 | 18.8 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 33.81 | 18.44 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 28.57 | 17.6 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 22.86 | 14.5 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5B01G315500 | EnsemblPlants:TraesCS5B01G315500.2 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr5B:+:497504456..497505166
Molecular Weight (calculated)
22815.9 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.462
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIYDY IPAHRRRVST ADFWPDADHS DAYSAAPDKG KLPPRAKRGR TNQYRGIRQR PWGKWAAEIR DPVKGVRVWL GTYPTAEAAA RAYDRAARRI
101: RGAKAKVNFP NEILVSAPAH EASCTMAAAP PAAVLPSPKK EEEGEGLEPA ACSCEEVKAL SEELMAYENY MSFLGVPYME GGAAAAPAAE EAPAELWSFE
201: DSYYPGPLGL
101: RGAKAKVNFP NEILVSAPAH EASCTMAAAP PAAVLPSPKK EEEGEGLEPA ACSCEEVKAL SEELMAYENY MSFLGVPYME GGAAAAPAAE EAPAELWSFE
201: DSYYPGPLGL
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.