Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G288000.1 | Wheat | nucleus | 97.23 | 98.01 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 96.84 | 96.84 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 54.55 | 77.97 |
| Os04t0398000-02 | Rice | nucleus | 68.38 | 64.55 |
| GSMUA_Achr10P... | Banana | nucleus | 46.25 | 51.54 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 46.64 | 42.45 |
| AT5G13330.1 | Thale cress | nucleus | 32.81 | 39.15 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 35.57 | 37.97 |
| CDX69647 | Canola | nucleus | 31.62 | 36.87 |
| Bra008835.1-P | Field mustard | nucleus | 31.23 | 36.41 |
| CDY09787 | Canola | nucleus | 31.23 | 35.43 |
| OQU81440 | Sorghum | nucleus | 67.59 | 34.48 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 39.53 | 34.36 |
| KRH01504 | Soybean | nucleus | 32.02 | 33.47 |
| TraesCS7B01G162100.1 | Wheat | plastid | 29.25 | 33.04 |
| CDX78517 | Canola | nucleus | 33.2 | 32.56 |
| CDX85656 | Canola | nucleus | 32.02 | 32.53 |
| Bra023404.1-P | Field mustard | nucleus | 32.02 | 32.53 |
| Bra006195.1-P | Field mustard | nucleus | 32.81 | 32.17 |
| CDX70498 | Canola | nucleus | 32.81 | 32.17 |
| CDX91131 | Canola | nucleus | 31.62 | 31.5 |
| KRH45195 | Soybean | nucleus | 33.2 | 30.32 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 20.16 | 27.57 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 19.76 | 26.74 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 26.09 | 26.29 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 19.37 | 26.06 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 26.09 | 25.48 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 26.48 | 25.09 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 20.55 | 24.76 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 22.53 | 23.55 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 30.43 | 22.58 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 20.16 | 21.61 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 20.95 | 20.95 |
| TraesCS4B01G299400.1 | Wheat | nucleus | 23.32 | 18.85 |
| TraesCS4B01G299500.1 | Wheat | nucleus | 22.13 | 17.72 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 18.58 | 16.85 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 24.51 | 16.06 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 22.53 | 16.06 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 22.53 | 15.57 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 22.53 | 14.81 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 22.53 | 14.32 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 17.0 | 13.78 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 19.37 | 12.79 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 16.6 | 12.69 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF73 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2B01G304800 | EnsemblPlants:TraesCS2B01G304800.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:+:434099631..434100822
Molecular Weight (calculated)
27000.6 Da
IEP (calculated)
10.160
GRAVY (calculated)
-0.521
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSALSHVIR ATPDQQQAYY PAGSAAVSGE QQHQHDAAAA AAIAEEQGRK RHYRGVRQRP WGKWAAEIRD PKKAARVWLG TFDTAEDAAI AYDEAALRFK
101: GTKAKLNFPE RVQGRTDLGF VVTRGIPDRL QQQQHYPATV GAPAMRPPPH QLQTVVPYPD LMRYARLLQG AGSAGGAVNL PFGAMSPPSM SSSAPHILDF
201: STQQLIRVSP ASPAAAMSSS GTTGPSTSSS TTTASSPGAA WPYTGEHKNN KDS
101: GTKAKLNFPE RVQGRTDLGF VVTRGIPDRL QQQQHYPATV GAPAMRPPPH QLQTVVPYPD LMRYARLLQG AGSAGGAVNL PFGAMSPPSM SSSAPHILDF
201: STQQLIRVSP ASPAAAMSSS GTTGPSTSSS TTTASSPGAA WPYTGEHKNN KDS
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.