Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85656 | Canola | nucleus | 100.0 | 100.0 |
| CDX91131 | Canola | nucleus | 96.79 | 94.88 |
| Bra008835.1-P | Field mustard | nucleus | 74.3 | 85.25 |
| AT5G13330.1 | Thale cress | nucleus | 68.67 | 80.66 |
| Bra006195.1-P | Field mustard | nucleus | 83.53 | 80.62 |
| KRH01504 | Soybean | nucleus | 39.36 | 40.5 |
| KRH45195 | Soybean | nucleus | 43.78 | 39.35 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 36.55 | 38.4 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 26.1 | 36.72 |
| Bra009272.1-P | Field mustard | nucleus | 36.55 | 35.97 |
| Bra019622.1-P | Field mustard | nucleus | 32.53 | 35.68 |
| Bra028703.1-P | Field mustard | nucleus | 36.14 | 35.29 |
| Bra005932.1-P | Field mustard | nucleus | 36.14 | 35.29 |
| Bra029302.1-P | Field mustard | nucleus | 35.34 | 34.65 |
| GSMUA_Achr10P... | Banana | nucleus | 31.33 | 34.36 |
| Bra005480.1-P | Field mustard | nucleus | 28.92 | 33.33 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 33.33 | 33.07 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 33.33 | 32.81 |
| Bra021871.1-P | Field mustard | nucleus | 28.11 | 32.41 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 32.53 | 32.02 |
| Bra034624.1-P | Field mustard | nucleus | 21.29 | 31.36 |
| Os04t0398000-02 | Rice | nucleus | 31.33 | 29.1 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 33.73 | 28.87 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 31.33 | 28.06 |
| Bra021401.1-P | Field mustard | nucleus | 21.69 | 25.35 |
| Bra021200.1-P | Field mustard | nucleus | 21.69 | 22.22 |
| Bra011529.1-P | Field mustard | nucleus | 23.29 | 22.14 |
| Bra022176.1-P | Field mustard | nucleus | 21.29 | 21.9 |
| Bra001640.1-P | Field mustard | nucleus | 20.88 | 21.22 |
| Bra017656.1-P | Field mustard | nucleus | 22.09 | 20.37 |
| Bra003883.1-P | Field mustard | nucleus | 19.68 | 20.16 |
| Bra016063.1-P | Field mustard | nucleus | 20.08 | 19.92 |
| OQU81440 | Sorghum | nucleus | 36.55 | 18.35 |
| Bra024325.1-P | Field mustard | nucleus | 28.92 | 18.23 |
| Bra031903.1-P | Field mustard | nucleus | 27.71 | 18.21 |
| Bra037794.1-P | Field mustard | nucleus | 26.91 | 17.59 |
| Bra001541.1-P | Field mustard | nucleus | 21.69 | 15.34 |
| Bra021543.1-P | Field mustard | nucleus | 21.69 | 14.79 |
| Bra030919.1-P | Field mustard | nucleus | 18.07 | 14.71 |
| Bra027355.1-P | Field mustard | nucleus | 21.69 | 14.25 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra023404 | EnsemblPlants:Bra023404.1 |
| EnsemblPlants:Bra023404.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4E3Q1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF58 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002543482 | SEG:seg |
Description
AT5G13330 (E=1e-042) Rap2.6L | Rap2.6L (related to AP2 6L); DNA binding / transcription factor
Coordinates
chrA02:+:3244745..3246754
Molecular Weight (calculated)
28097.1 Da
IEP (calculated)
5.140
GRAVY (calculated)
-1.043
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGKGPAPPE TSAEEYPSWN ESDVTAMMSS FSNVIEYPAA DGHKMSDPPV KQELDKSDQL QQDQDQPRKK HYRGVRQRPW GKWAAEIRDP KKAARVWLGT
101: FETAEEAALA YDRAALKFKG TKAKLNFPER VQGPSTTSYV ASQSSCDHPP RGGNELMNTA PPLLGPSTTP TSWPADYNQD ILQYAQLLTS NNDVDLSYYT
201: SSLFSSQQQP FSTPSSSSSS SLTSQQMQQQ QQREEEKNYG YNYYYYPRE
101: FETAEEAALA YDRAALKFKG TKAKLNFPER VQGPSTTSYV ASQSSCDHPP RGGNELMNTA PPLLGPSTTP TSWPADYNQD ILQYAQLLTS NNDVDLSYYT
201: SSLFSSQQQP FSTPSSSSSS SLTSQQMQQQ QQREEEKNYG YNYYYYPRE
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.