Factsheet for Bra005932.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78288	Canola	nucleus	99.22	99.22
Bra009272.1-P	Field mustard	nucleus	86.67	87.35
Bra028703.1-P	Field mustard	nucleus	80.39	80.39
Bra019622.1-P	Field mustard	nucleus	60.0	67.4
Bra029302.1-P	Field mustard	nucleus	61.18	61.42
Solyc03g118190.2.1	Tomato	nucleus	40.0	41.8
PGSC0003DMT400036934	Potato	nucleus	41.18	38.04
KRH63877	Soybean	nucleus	29.41	37.31
KRH54084	Soybean	nucleus	39.22	37.17
KRH63879	Soybean	nucleus	38.04	37.02
VIT_17s0000g00200.t01	Wine grape	nucleus	35.29	36.59
Bra023404.1-P	Field mustard	nucleus	35.29	36.14
Bra008835.1-P	Field mustard	nucleus	30.59	35.94
Bra006195.1-P	Field mustard	nucleus	34.9	34.5
GSMUA_Achr11P...	Banana	nucleus	33.33	33.2
Bra005480.1-P	Field mustard	nucleus	27.45	32.41
Bra021871.1-P	Field mustard	nucleus	26.67	31.48
Bra034624.1-P	Field mustard	nucleus	19.61	29.59
Bra021401.1-P	Field mustard	nucleus	20.39	24.41
Bra011529.1-P	Field mustard	nucleus	23.53	22.9
Bra017656.1-P	Field mustard	nucleus	22.35	21.11
Bra021200.1-P	Field mustard	nucleus	20.0	20.99
Bra022176.1-P	Field mustard	nucleus	19.61	20.66
Bra037794.1-P	Field mustard	nucleus	30.2	20.21
Bra001640.1-P	Field mustard	nucleus	19.22	20.0
Bra024325.1-P	Field mustard	nucleus	30.59	19.75
Bra031903.1-P	Field mustard	nucleus	29.02	19.53
Bra003883.1-P	Field mustard	nucleus	18.43	19.34
Bra016063.1-P	Field mustard	nucleus	18.82	19.12
Bra001541.1-P	Field mustard	nucleus	22.35	16.19
Bra021543.1-P	Field mustard	nucleus	22.75	15.89
Bra030919.1-P	Field mustard	nucleus	18.82	15.69
Bra027355.1-P	Field mustard	nucleus	22.75	15.3

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra005932	EnsemblPlants:Bra005932.1
EnsemblPlants:Bra005932.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CNZ4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF41	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000253F6BD	SEG:seg

Description

AT5G07310 (E=2e-080) | AP2 domain-containing transcription factor, putative

Coordinates

chrA03:+:1283777..1284766

Molecular Weight (calculated)

28664.5 Da

IEP (calculated)

6.516

GRAVY (calculated)

-1.012

Length

255 amino acids

Sequence
(BLAST)

001: MNNGKRPFRA GESEEKKEAD DDENIFPFFS ARSEYDTRAM VSALTQVIGN QSSTHDNNLH HPVEYDQQDP IQHVPPTQDH GNLRKIHYRG VRQRPWGKWA
101: AEIRDPQKAA RVWLGTFETA EAAALAYDEA ALKFKGSKAK LNFPERAQLA SNTSTITGLP NYYSSNNQTY YSNPQTNPQN IPYYNQYYYN QYLQQGGNSN
201: DALSYSLAGG ETGGSIYSHQ TLSNTTSSPA GGSLRQQEDY TRFWHFGDSS PNSGV

Best Arabidopsis Sequence Match ( AT5G07310.1 )
(BLAST)

001: MANSGNYGKR PFRGDESDEK KEADDDENIF PFFSARSQYD MRAMVSALTQ VIGNQSSSHD NNQHQPVVYN QQDPNPPAPP TQDQGLLRKR HYRGVRQRPW
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF

Arabidopsis Description

ERF115Ethylene-responsive transcription factor ERF115 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY29]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.