Factsheet for Bra021401.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51428	Canola	nucleus	91.55	99.49
CDY27480	Canola	nucleus	83.57	92.23
AT2G47520.1	Thale cress	nucleus	54.46	67.84
Bra034624.1-P	Field mustard	nucleus	25.35	31.95
Bra003883.1-P	Field mustard	nucleus	35.68	31.28
Bra001640.1-P	Field mustard	nucleus	34.74	30.2
TraesCS1A01G231200.1	Wheat	nucleus	24.88	29.44
Bra022176.1-P	Field mustard	nucleus	33.33	29.34
Bra021200.1-P	Field mustard	nucleus	33.33	29.22
Bra016063.1-P	Field mustard	nucleus	34.27	29.08
TraesCS1D01G230900.1	Wheat	nucleus	24.88	28.8
HORVU1Hr1G058940.4	Barley	nucleus, plastid	24.41	27.96
GSMUA_Achr3P08180_001	Banana	nucleus	25.82	27.92
TraesCS1B01G243200.1	Wheat	nucleus	23.94	27.57
Os05t0361700-01	Rice	nucleus	25.35	27.27
Zm00001d037941_P001	Maize	nucleus	24.41	26.94
Bra005480.1-P	Field mustard	nucleus	27.23	26.85
Bra021871.1-P	Field mustard	nucleus	26.76	26.39
EES18078	Sorghum	nucleus	24.41	26.13
Bra008835.1-P	Field mustard	nucleus	25.35	24.88
Bra001541.1-P	Field mustard	nucleus	38.5	23.3
GSMUA_Achr8P22500_001	Banana	nucleus	26.76	23.17
Bra021543.1-P	Field mustard	nucleus	39.44	23.01
Bra019622.1-P	Field mustard	nucleus	24.41	22.91
Bra030919.1-P	Field mustard	nucleus	31.92	22.22
Bra027355.1-P	Field mustard	nucleus	38.97	21.9
Bra023404.1-P	Field mustard	nucleus	25.35	21.69
Bra028703.1-P	Field mustard	nucleus	25.82	21.57
Bra011529.1-P	Field mustard	nucleus	26.29	21.37
Bra006195.1-P	Field mustard	nucleus	25.35	20.93
Bra029302.1-P	Field mustard	nucleus	24.88	20.87
Bra005932.1-P	Field mustard	nucleus	24.41	20.39
Bra009272.1-P	Field mustard	nucleus	23.94	20.16
Bra017656.1-P	Field mustard	nucleus	24.88	19.63
Bra031903.1-P	Field mustard	nucleus	31.46	17.68
Bra037794.1-P	Field mustard	nucleus	30.52	17.06
Bra024325.1-P	Field mustard	nucleus	31.46	16.96

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra021401	EnsemblPlants:Bra021401.1
EnsemblPlants:Bra021401.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0034059	GO:GO:2000280	InterPro:IPR001471
InterPro:IPR036955	UniProt:M4DY05	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF14	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002544CBB	SEG:seg	:

Description

AT2G47520 (E=2e-018) | AP2 domain-containing transcription factor, putative

Coordinates

chrA01:+:25363557..25364294

Molecular Weight (calculated)

24041.3 Da

IEP (calculated)

8.775

GRAVY (calculated)

-0.828

Length

213 amino acids

Sequence
(BLAST)

001: MCGGAVISDF IWSLRRASFA EAEPSQVGYE GCVSIEKRVC SGSVGGEKRK EKKKEGKNKR ERKNMYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFKTAEE
101: AARAYDSAAI RIRGGKAKLN FPNDDSSSTR RNCIIKKNKE VCGGDHLMNA CDQSPPPTDD TENQQVKQLS EELMAYEDYM GFYQIPYLDG QSSTEDVPQL
201: SLIGNLWSFQ DNV

Best Arabidopsis Sequence Match ( AT2G47520.1 )
(BLAST)

001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N

Arabidopsis Description

ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.