Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82492 | Canola | nucleus | 95.17 | 95.17 |
| CDX75756 | Canola | nucleus | 90.34 | 91.38 |
| Bra021543.1-P | Field mustard | nucleus | 75.0 | 72.33 |
| Bra027355.1-P | Field mustard | nucleus | 77.56 | 72.03 |
| AT3G14230.1 | Thale cress | nucleus | 75.0 | 69.66 |
| Bra030919.1-P | Field mustard | nucleus | 55.11 | 63.4 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 23.86 | 42.42 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 24.43 | 42.16 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 24.43 | 40.95 |
| Os01t0313300-01 | Rice | nucleus | 23.01 | 39.13 |
| Bra021401.1-P | Field mustard | nucleus | 23.3 | 38.5 |
| EES00666 | Sorghum | nucleus | 23.3 | 36.12 |
| Zm00001d009103_P001 | Maize | nucleus | 23.01 | 35.22 |
| Zm00001d040651_P001 | Maize | nucleus | 23.01 | 34.18 |
| Bra021200.1-P | Field mustard | nucleus | 23.58 | 34.16 |
| Bra003883.1-P | Field mustard | nucleus | 23.58 | 34.16 |
| Bra016063.1-P | Field mustard | nucleus | 23.86 | 33.47 |
| Bra022176.1-P | Field mustard | nucleus | 22.73 | 33.06 |
| Bra001640.1-P | Field mustard | nucleus | 22.73 | 32.65 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 24.15 | 28.43 |
| Bra034624.1-P | Field mustard | nucleus | 13.64 | 28.4 |
| Bra021871.1-P | Field mustard | nucleus | 16.48 | 26.85 |
| Bra005480.1-P | Field mustard | nucleus | 16.19 | 26.39 |
| Bra008835.1-P | Field mustard | nucleus | 14.77 | 23.96 |
| Bra019622.1-P | Field mustard | nucleus | 15.06 | 23.35 |
| Bra028703.1-P | Field mustard | nucleus | 16.48 | 22.75 |
| Zm00001d007033_P001 | Maize | plastid | 18.18 | 22.54 |
| Bra009272.1-P | Field mustard | nucleus | 16.19 | 22.53 |
| Bra005932.1-P | Field mustard | nucleus | 16.19 | 22.35 |
| Bra006195.1-P | Field mustard | nucleus | 16.19 | 22.09 |
| Bra023404.1-P | Field mustard | nucleus | 15.34 | 21.69 |
| Bra029302.1-P | Field mustard | nucleus | 15.34 | 21.26 |
| Bra031903.1-P | Field mustard | nucleus | 22.73 | 21.11 |
| Bra011529.1-P | Field mustard | nucleus | 15.06 | 20.23 |
| Bra024325.1-P | Field mustard | nucleus | 22.16 | 19.75 |
| Bra037794.1-P | Field mustard | nucleus | 21.31 | 19.68 |
| Bra017656.1-P | Field mustard | nucleus | 14.49 | 18.89 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra001541 | EnsemblPlants:Bra001541.1 |
| EnsemblPlants:Bra001541.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4CBG1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002540965 | SEG:seg |
Description
AT3G14230 (E=8e-107) RAP2.2 | RAP2.2; DNA binding / transcription factor
Coordinates
chrA03:-:16924358..16926058
Molecular Weight (calculated)
39552.7 Da
IEP (calculated)
4.647
GRAVY (calculated)
-0.747
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISEF IPPPKSRRVT SEFIWPDLKN LKKKSRKRSH FFDLDNEFEA DFKGFKDDDS SFECEDGFDV KPFAFTAATK PVASLPTNVA STGSVSDKKA
101: VESDEKSGKR KRKNQYRGIR LRPWGKWAAE IRDPRKGSRE WLGTFETAEE AARAYDAAAR RIRGDKAKVN FPEEVISSPK KPVAKPNQTP TLVQPPTHVS
201: QYCNNNSFDS MGHDSLSFVE EKPQIYNNQF FDVGQYFNSD QGSNSFDCSE FGWSDHAPKT PPEISSMVVN NNQATFAEQT IAAKKVKLNS EDETSDNDDL
301: MVYLDNALWE SPLEMEAMLG VDAAATGVAQ EEENPMELWS LDDINFMLDG DF
101: VESDEKSGKR KRKNQYRGIR LRPWGKWAAE IRDPRKGSRE WLGTFETAEE AARAYDAAAR RIRGDKAKVN FPEEVISSPK KPVAKPNQTP TLVQPPTHVS
201: QYCNNNSFDS MGHDSLSFVE EKPQIYNNQF FDVGQYFNSD QGSNSFDCSE FGWSDHAPKT PPEISSMVVN NNQATFAEQT IAAKKVKLNS EDETSDNDDL
301: MVYLDNALWE SPLEMEAMLG VDAAATGVAQ EEENPMELWS LDDINFMLDG DF
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.