Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d047935_P003 | |
| Zm00001d049956_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53910.1 | Zm00001d047935_P003 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | Zm00001d049956_P002 | AT2G44040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00666 | Sorghum | nucleus | 86.09 | 87.22 |
| Zm00001d040651_P001 | Maize | nucleus | 85.65 | 83.12 |
| Os01t0313300-01 | Rice | nucleus | 65.22 | 72.46 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 60.87 | 70.71 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 60.87 | 68.63 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 61.74 | 67.62 |
| Zm00001d007033_P001 | Maize | plastid | 82.17 | 66.55 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 61.74 | 47.49 |
| Zm00001d037941_P001 | Maize | nucleus | 25.22 | 30.05 |
| Zm00001d031673_P001 | Maize | nucleus | 22.61 | 26.8 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 38.26 | 24.24 |
| Zm00001d021089_P001 | Maize | nucleus | 23.91 | 24.23 |
| Zm00001d027925_P001 | Maize | nucleus | 35.65 | 24.12 |
| Bra021543.1-P | Field mustard | nucleus | 37.83 | 23.84 |
| CDX75756 | Canola | nucleus | 35.65 | 23.56 |
| Zm00001d018158_P001 | Maize | nucleus | 23.91 | 23.31 |
| Zm00001d052087_P001 | Maize | nucleus | 36.52 | 23.27 |
| Bra027355.1-P | Field mustard | nucleus | 38.26 | 23.22 |
| CDX98435 | Canola | nucleus | 38.26 | 23.22 |
| Bra001541.1-P | Field mustard | nucleus | 35.22 | 23.01 |
| CDX82492 | Canola | nucleus | 35.22 | 23.01 |
| CDY02492 | Canola | nucleus | 30.43 | 22.88 |
| Bra030919.1-P | Field mustard | nucleus | 30.43 | 22.88 |
| CDY25681 | Canola | nucleus | 30.43 | 22.8 |
| CDY65334 | Canola | nucleus | 37.83 | 22.72 |
| AT3G14230.1 | Thale cress | nucleus | 36.96 | 22.43 |
| CDY39107 | Canola | nucleus | 37.83 | 22.31 |
| AT1G53910.1 | Thale cress | nucleus | 33.91 | 21.79 |
| Zm00001d005892_P001 | Maize | nucleus | 24.78 | 21.67 |
| Zm00001d052167_P001 | Maize | nucleus | 21.3 | 21.3 |
| Zm00001d031796_P001 | Maize | nucleus | 24.78 | 21.19 |
| Zm00001d016616_P001 | Maize | nucleus | 23.48 | 21.18 |
| CDX97559 | Canola | nucleus | 38.26 | 20.61 |
| Zm00001d020595_P001 | Maize | nucleus | 35.22 | 19.38 |
| Zm00001d053195_P002 | Maize | nucleus | 26.96 | 18.84 |
| Zm00001d032095_P001 | Maize | nucleus | 30.87 | 18.68 |
| Zm00001d005798_P001 | Maize | nucleus | 33.48 | 18.2 |
| Zm00001d023535_P001 | Maize | nucleus | 27.83 | 15.13 |
| Zm00001d047339_P001 | Maize | plastid | 26.96 | 13.75 |
| Zm00001d018305_P001 | Maize | nucleus | 14.35 | 11.7 |
| Zm00001d045386_P002 | Maize | plastid | 11.3 | 6.37 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:542184 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQK91332.1 |
| UniProt:B6TYN8 | ncoils:Coil | InterPro:DNA-bd_dom_sf | EMBL:EU970103 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EMBL:KJ728239 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI000182F63A | EnsemblPlantsGene:Zm00001d009103 | EnsemblPlants:Zm00001d009103_P001 | EnsemblPlants:Zm00001d009103_T001 | SEG:seg | : |
Description
AP2-EREBP-transcription factor 148Ethylene-responsive factor-like protein 1%3B Putative AP2/EREBP transcription factor superfamily protein
Coordinates
chr8:+:36535940..36537052
Molecular Weight (calculated)
24764.0 Da
IEP (calculated)
8.867
GRAVY (calculated)
-0.408
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIFDY IPARRRVSTA DFWPGSEADA EDIHASHSTD PQRAPPPRAK AKPGRRKNQY RGIRQRPWGK WAAEIRDPVK GVRVWLGTYP TAEAAARAYD
101: RAARRIRGAK AKVNFPSDTS SSVTVPTAVS RSAAAAAAQA PAVLPLPKVE AQTQVSDEVK ELSEELMAYE NYMNFLGIPY MEGGTTAASA TTAAASAAAG
201: VAEESQVPAP AGLWSFEDYY YPPSLSLFTE
101: RAARRIRGAK AKVNFPSDTS SSVTVPTAVS RSAAAAAAQA PAVLPLPKVE AQTQVSDEVK ELSEELMAYE NYMNFLGIPY MEGGTTAASA TTAAASAAAG
201: VAEESQVPAP AGLWSFEDYY YPPSLSLFTE
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.