Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13952 | Sorghum | nucleus | 75.79 | 77.63 |
| Zm00001d040651_P001 | Maize | nucleus | 19.74 | 31.65 |
| Zm00001d009103_P001 | Maize | nucleus | 18.68 | 30.87 |
| Zm00001d052087_P001 | Maize | nucleus | 27.63 | 29.09 |
| Zm00001d037941_P001 | Maize | nucleus | 14.74 | 29.02 |
| KRH69017 | Soybean | nucleus | 26.05 | 28.7 |
| KRG97290 | Soybean | nucleus | 22.37 | 28.43 |
| GSMUA_Achr10P... | Banana | nucleus | 21.32 | 28.22 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 26.05 | 27.27 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 27.11 | 27.18 |
| KRH06265 | Soybean | nucleus | 26.32 | 26.18 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 26.05 | 25.98 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 26.05 | 25.65 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 25.0 | 25.2 |
| Solyc06g063070.2.1 | Tomato | nucleus | 24.21 | 24.73 |
| KRH47694 | Soybean | nucleus | 25.0 | 24.23 |
| PGSC0003DMT400012547 | Potato | nucleus | 23.68 | 24.19 |
| Solyc03g123500.2.1 | Tomato | nucleus | 24.47 | 24.09 |
| Zm00001d007033_P001 | Maize | plastid | 17.89 | 23.94 |
| PGSC0003DMT400023609 | Potato | nucleus | 24.47 | 23.85 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 25.0 | 23.34 |
| Solyc12g049560.1.1 | Tomato | nucleus | 23.42 | 23.06 |
| Zm00001d031673_P001 | Maize | nucleus | 11.58 | 22.68 |
| PGSC0003DMT400074248 | Potato | nucleus | 22.89 | 22.42 |
| Zm00001d005798_P001 | Maize | nucleus | 24.74 | 22.22 |
| Zm00001d021089_P001 | Maize | nucleus | 13.16 | 22.03 |
| Zm00001d020595_P001 | Maize | nucleus | 23.95 | 21.77 |
| Zm00001d052167_P001 | Maize | nucleus | 12.89 | 21.3 |
| Zm00001d018158_P001 | Maize | nucleus | 12.89 | 20.76 |
| Zm00001d027925_P001 | Maize | nucleus | 17.63 | 19.71 |
| Zm00001d047339_P001 | Maize | plastid | 21.58 | 18.18 |
| Zm00001d031796_P001 | Maize | nucleus | 12.37 | 17.47 |
| Zm00001d016616_P001 | Maize | nucleus | 11.58 | 17.25 |
| Zm00001d005892_P001 | Maize | nucleus | 11.84 | 17.11 |
| Zm00001d018305_P001 | Maize | nucleus | 11.05 | 14.89 |
| Zm00001d053195_P002 | Maize | nucleus | 12.37 | 14.29 |
| Zm00001d023535_P001 | Maize | nucleus | 12.37 | 11.11 |
| Zm00001d045386_P002 | Maize | plastid | 11.58 | 10.78 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A1D6KNH4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| ProteinID:ONM04366.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF73 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00084298D2 | EnsemblPlantsGene:Zm00001d032095 | EnsemblPlants:Zm00001d032095_P001 | EnsemblPlants:Zm00001d032095_T001 |
| SEG:seg | : | : | : | : | : |
Description
AP2-EREBP-transcription factor 167Ethylene-responsive transcription factor RAP2-2
Coordinates
chr1:-:212364322..212366865
Molecular Weight (calculated)
42656.1 Da
IEP (calculated)
9.484
GRAVY (calculated)
-0.663
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSPPTKRHK PVVGKGQGKL QDSMAKNYRE RRLKRVMKID EGEDDFEADY QAFSKKYDEK DECHYKFMAL LPFKNGLPNV SPPTKEKVGL HFAMKDVVIS
101: QKPTTTNEGI IVRPKCKRKT PYRGIRRRPW GKWAAEIRDP TKGVRVWLGT YKTPEDAARA YDAEARKIRG NKAKVNFPNE PPNMVSNSPK LIVTAMTTMA
201: IPADKLNANE LMCHKNYSNE DFFSMVNFSG NNGNFISTAA FGLQCIKKPR VPYGIPRIGE CSNQNRMTYG LSNGLGNEAS RNLNGCSFLP QAGMPIFIQP
301: TFDGPSRMIG RNDGVIVPTL TNATPMAGVD AAKKMNQEPI FQEMESEDIP SILQGDVSED VAAEISMWEF YDNLLDNKEN
101: QKPTTTNEGI IVRPKCKRKT PYRGIRRRPW GKWAAEIRDP TKGVRVWLGT YKTPEDAARA YDAEARKIRG NKAKVNFPNE PPNMVSNSPK LIVTAMTTMA
201: IPADKLNANE LMCHKNYSNE DFFSMVNFSG NNGNFISTAA FGLQCIKKPR VPYGIPRIGE CSNQNRMTYG LSNGLGNEAS RNLNGCSFLP QAGMPIFIQP
301: TFDGPSRMIG RNDGVIVPTL TNATPMAGVD AAKKMNQEPI FQEMESEDIP SILQGDVSED VAAEISMWEF YDNLLDNKEN
001: MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP FVFSSTHKHH ASGSASDGKK KQSSRYKGIR RRPWGRWAAE IRDPIKGVRV
101: WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
201: KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS LFDGGNDMGL WS
101: WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
201: KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS LFDGGNDMGL WS
Arabidopsis Description
HRE1Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IDA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.