Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400074248 | Potato | nucleus | 90.93 | 90.46 |
Solyc03g123500.2.1 | Tomato | nucleus | 55.7 | 55.7 |
Solyc06g063070.2.1 | Tomato | nucleus | 49.22 | 51.08 |
GSMUA_Achr6P10870_001 | Banana | nucleus | 29.27 | 47.68 |
Os02t0782700-01 | Rice | nucleus | 34.97 | 36.99 |
EES07642 | Sorghum | nucleus | 35.23 | 36.96 |
Os06t0194000-02 | Rice | nucleus | 34.46 | 36.74 |
Zm00001d052087_P001 | Maize | nucleus | 34.2 | 36.57 |
Zm00001d045044_P001 | Maize | nucleus, plastid | 34.2 | 36.36 |
TraesCSU01G183700.1 | Wheat | nucleus | 26.68 | 36.27 |
Solyc09g075420.2.1 | Tomato | nucleus | 24.09 | 35.77 |
EER87998 | Sorghum | nucleus | 33.16 | 35.75 |
TraesCS7A01G158000.1 | Wheat | nucleus | 32.64 | 35.69 |
Os09t0434500-01 | Rice | vacuole | 36.53 | 35.61 |
TraesCS7D01G158500.1 | Wheat | nucleus | 32.64 | 35.49 |
TraesCS5B01G214400.1 | Wheat | nucleus | 35.23 | 35.23 |
TraesCS7B01G062200.1 | Wheat | nucleus | 32.38 | 35.21 |
TraesCS5D01G223700.1 | Wheat | nucleus | 34.72 | 35.17 |
TraesCS5A01G215900.1 | Wheat | nucleus | 34.2 | 35.01 |
HORVU6Hr1G082880.1 | Barley | nucleus | 33.16 | 34.69 |
KXG35689 | Sorghum | nucleus, plastid | 34.97 | 34.62 |
HORVU0Hr1G021820.1 | Barley | nucleus | 25.65 | 34.62 |
TraesCS6D01G324200.1 | Wheat | nucleus | 35.23 | 34.17 |
TraesCS6A01G343300.1 | Wheat | nucleus | 35.23 | 34.17 |
TraesCS6D01G085000.1 | Wheat | nucleus | 28.5 | 33.95 |
TraesCS6B01G375400.1 | Wheat | nucleus | 34.72 | 33.67 |
HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 33.94 | 33.59 |
TraesCS7D01G416300.1 | Wheat | nucleus | 28.76 | 33.53 |
TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 20.47 | 33.47 |
TraesCS7D01G378200.1 | Wheat | nucleus | 23.83 | 32.97 |
TraesCS7B01G283900.1 | Wheat | nucleus | 23.83 | 32.97 |
TraesCS6D01G084200.1 | Wheat | nucleus | 32.12 | 32.72 |
Solyc01g065980.2.1 | Tomato | nucleus | 21.5 | 32.68 |
TraesCS6B01G126600.1 | Wheat | nucleus | 30.83 | 32.51 |
HORVU6Hr1G017530.1 | Barley | nucleus | 32.9 | 32.48 |
Zm00001d020595_P001 | Maize | nucleus | 34.72 | 32.06 |
KXG36690 | Sorghum | nucleus | 26.42 | 31.88 |
HORVU7Hr1G090440.1 | Barley | nucleus | 30.83 | 31.82 |
TraesCS7B01G324400.1 | Wheat | nucleus | 25.65 | 31.73 |
TraesCS6A01G097500.1 | Wheat | nucleus | 29.79 | 31.59 |
TraesCS7A01G377400.1 | Wheat | nucleus | 27.72 | 31.47 |
HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 33.16 | 31.45 |
TraesCS6A01G097700.1 | Wheat | nucleus | 29.27 | 31.22 |
Os07t0617000-02 | Rice | nucleus | 27.46 | 30.99 |
HORVU6Hr1G082840.1 | Barley | nucleus | 24.87 | 30.77 |
TraesCS7D01G373700.1 | Wheat | nucleus | 28.5 | 30.64 |
HORVU6Hr1G076090.2 | Barley | nucleus | 25.39 | 30.62 |
Zm00001d005798_P001 | Maize | nucleus | 33.16 | 30.26 |
TraesCS6D01G084900.1 | Wheat | nucleus | 30.05 | 29.82 |
HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 24.87 | 29.72 |
HORVU6Hr1G064370.1 | Barley | nucleus | 22.28 | 29.66 |
TraesCS6B01G125900.1 | Wheat | nucleus | 29.53 | 29.61 |
TraesCS7B01G278700.1 | Wheat | nucleus | 27.98 | 28.2 |
Solyc02g090800.1.1 | Tomato | nucleus | 9.33 | 27.48 |
Solyc02g090770.1.1 | Tomato | nucleus | 13.73 | 26.11 |
TraesCS6B01G427100.1 | Wheat | nucleus | 21.76 | 25.38 |
Zm00001d018305_P001 | Maize | nucleus | 18.39 | 25.18 |
EES13952 | Sorghum | nucleus | 22.8 | 23.72 |
Zm00001d032095_P001 | Maize | nucleus | 23.06 | 23.42 |
Solyc02g090790.1.1 | Tomato | nucleus | 13.21 | 22.47 |
Solyc10g050970.1.1 | Tomato | nucleus | 12.18 | 21.08 |
Solyc03g118190.2.1 | Tomato | nucleus | 13.21 | 20.9 |
Zm00001d047339_P001 | Maize | plastid | 24.35 | 20.84 |
Solyc04g051360.2.1 | Tomato | nucleus | 14.77 | 18.81 |
Solyc12g042210.1.1 | Tomato | nucleus | 13.73 | 18.47 |
Solyc12g056590.1.1 | Tomato | nucleus | 14.51 | 18.06 |
Solyc06g068830.1.1 | Tomato | nucleus | 12.95 | 17.3 |
Solyc01g108240.2.1 | Tomato | nucleus | 12.95 | 16.95 |
Solyc04g012050.2.1 | Tomato | nucleus | 15.29 | 14.82 |
Zm00001d045386_P002 | Maize | plastid | 15.03 | 14.22 |
Solyc04g071770.2.1 | Tomato | nucleus | 15.8 | 13.5 |
Protein Annotations
MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4DFN6 |
PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 |
SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc12g049560.1 | EnsemblPlants:Solyc12g049560.1.1 | UniParc:UPI0002769B7D | SEG:seg | : |
Description
No Description!
Coordinates
chr12:+:36676726..36678944
Molecular Weight (calculated)
42703.3 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.719
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDW IPPSRSSSRL TADQLWGCAD LQNKKRNKKK RNPSNYHSKR LRSENVDFEA DFQDFKDFSD DEEAYSLDIK PFAFSASELS GTSAGSESLI
101: SVDANKEVEK SAKRQRKNQY RGIRKRPWGK WAAEIRDPQK GVRVWIGTFN TAEEAARAYD AEARRIRGNK AKVNFPDEAS VPASRQAGKV NPRKVLSDES
201: SNPVPPNTML MNNLNSGYCD NVGLLEEKTK TLNGYEALCV TPVDTGPNPY PHPAAAGVYF NSDQGSNSFG PSDFWGETCS RTPDISSVLS AAIECDEAQF
301: IEGVDLEEKP KSCTNNLVPN NVNTEHKPPE VFSTFESQLK FYQTPYSEGN MDVPVDAFLD ADATQGVENA MDLWSFDELS SLMGGI
101: SVDANKEVEK SAKRQRKNQY RGIRKRPWGK WAAEIRDPQK GVRVWIGTFN TAEEAARAYD AEARRIRGNK AKVNFPDEAS VPASRQAGKV NPRKVLSDES
201: SNPVPPNTML MNNLNSGYCD NVGLLEEKTK TLNGYEALCV TPVDTGPNPY PHPAAAGVYF NSDQGSNSFG PSDFWGETCS RTPDISSVLS AAIECDEAQF
301: IEGVDLEEKP KSCTNNLVPN NVNTEHKPPE VFSTFESQLK FYQTPYSEGN MDVPVDAFLD ADATQGVENA MDLWSFDELS SLMGGI
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.