Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010296 | Potato | nucleus | 74.01 | 82.76 |
| Solyc02g090800.1.1 | Tomato | nucleus | 45.37 | 78.63 |
| PGSC0003DMT400010297 | Potato | nucleus | 68.72 | 78.39 |
| Solyc02g090770.1.1 | Tomato | nucleus | 59.03 | 66.01 |
| VIT_07s0031g00710.t01 | Wine grape | nucleus | 27.31 | 33.33 |
| VIT_07s0031g00720.t01 | Wine grape | nucleus | 28.63 | 30.23 |
| Solyc10g050970.1.1 | Tomato | nucleus | 28.63 | 29.15 |
| Solyc01g108240.2.1 | Tomato | nucleus | 29.52 | 22.71 |
| Solyc03g118190.2.1 | Tomato | nucleus | 23.79 | 22.13 |
| Solyc04g051360.2.1 | Tomato | nucleus | 27.31 | 20.46 |
| Solyc01g065980.2.1 | Tomato | nucleus | 22.03 | 19.68 |
| Solyc12g056590.1.1 | Tomato | nucleus | 26.87 | 19.68 |
| Solyc09g075420.2.1 | Tomato | nucleus | 22.03 | 19.23 |
| Solyc06g068830.1.1 | Tomato | nucleus | 23.79 | 18.69 |
| Solyc12g042210.1.1 | Tomato | nucleus | 23.35 | 18.47 |
| Solyc04g012050.2.1 | Tomato | nucleus | 28.63 | 16.33 |
| Solyc06g063070.2.1 | Tomato | nucleus | 23.35 | 14.25 |
| Solyc04g071770.2.1 | Tomato | nucleus | 28.19 | 14.16 |
| Solyc12g049560.1.1 | Tomato | nucleus | 22.47 | 13.21 |
| Solyc03g123500.2.1 | Tomato | nucleus | 21.15 | 12.44 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:K4BCM8 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc02g090790.1 | EnsemblPlants:Solyc02g090790.1.1 | UniParc:UPI00027675F8 | SEG:seg |
Description
No Description!
Coordinates
chr2:-:52293354..52294037
Molecular Weight (calculated)
25376.7 Da
IEP (calculated)
6.813
GRAVY (calculated)
-0.716
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRFRQDSLL EENNSYPLAH KLTENQELYY MVSALRHVVS GAGAGDVRAN GEAAQLLLEV QNASGGSSST SANSMPRRSS INVELGKGKK RRRRNMKKEF
101: RGVRQRPWGK WAAEIRDPHK AQRLWLGTFA TAEDAARAYD KKAIEFRGEK AKTNFPISEY TARAVNDEIN KLASVVMEEE RELLVQVLNG GDVAVNGENG
201: SSIQNGDEDD FWETLEDDGL VKWICSA
101: RGVRQRPWGK WAAEIRDPHK AQRLWLGTFA TAEDAARAYD KKAIEFRGEK AKTNFPISEY TARAVNDEIN KLASVVMEEE RELLVQVLNG GDVAVNGENG
201: SSIQNGDEDD FWETLEDDGL VKWICSA
001: MAPTVKTAAV KTNEGNGVRY RGVRKRPWGR YAAEIRDPFK KSRVWLGTFD TPEEAARAYD KRAIEFRGAK AKTNFPCYNI NAHCLSLTQS LSQSSTVESS
101: FPNLNLGSDS VSSRFPFPKI QVKAGMMVFD ERSESDSSSV VMDVVRYEGR RVVLDLDLNF PPPPEN
101: FPNLNLGSDS VSSRFPFPKI QVKAGMMVFD ERSESDSSSV VMDVVRYEGR RVVLDLDLNF PPPPEN
Arabidopsis Description
ERF11ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.