Factsheet for VIT_07s0031g00710.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g00720.t01	Wine grape	nucleus	42.47	36.74
Solyc02g090800.1.1	Tomato	nucleus	24.73	35.11
VIT_03s0063g00460.t01	Wine grape	nucleus	41.94	31.58
PGSC0003DMT400011537	Potato	mitochondrion, nucleus	30.65	30.48
Solyc02g090770.1.1	Tomato	nucleus	31.72	29.06
PGSC0003DMT400010297	Potato	nucleus	29.57	27.64
PGSC0003DMT400010296	Potato	nucleus	30.11	27.59
Solyc02g090790.1.1	Tomato	nucleus	33.33	27.31
VIT_01s0150g00120.t01	Wine grape	nucleus, plastid	26.34	20.68
VIT_17s0000g00200.t01	Wine grape	nucleus	25.81	19.51
VIT_05s0077g01860.t01	Wine grape	nucleus	25.27	18.15
VIT_07s0005g00820.t01	Wine grape	nucleus	25.27	18.15
VIT_07s0031g01980.t01	Wine grape	nucleus	31.18	16.48
VIT_14s0068g01040.t01	Wine grape	nucleus	25.81	14.91
VIT_09s0002g00470.t01	Wine grape	nucleus	27.42	13.46
VIT_18s0072g00260.t01	Wine grape	nucleus	33.33	13.11

Protein Annotations

EntrezGene:104879942	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:CCB47072	ProteinID:CCB47072.1	InterPro:DNA-bd_dom_sf	UniProt:F6H4K8	EMBL:FN595233	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0001983AC4	ArrayExpress:VIT_07s0031g00710	EnsemblPlantsGene:VIT_07s0031g00710	EnsemblPlants:VIT_07s0031g00710.t01	RefSeq:XP_010653006.1	SEG:seg

Description

No Description!

Coordinates

chr7:+:16884671..16885274

Molecular Weight (calculated)

20832.3 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.896

Length

186 amino acids

Sequence
(BLAST)

001: MNTEEESAII VSTLRNVIAG TTEHPENVMS ASTSTTTTTT HTQQTQTLLS LPPPEKCPHC DYDGCIGCNL FVGPGETEDA RGKVKFRGVR QRPWGKWAAE
101: IRDPRRGMRV WLGTFDTAEA AARAYDRKSY EFRGIRARLN FPLSDYKNEK KSNNISEEGE PSASDTAEKK KLENMNAETS SKELRE

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.