Factsheet for VIT_07s0031g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g00710.t01	Wine grape	nucleus	36.74	42.47
Solyc02g090800.1.1	Tomato	nucleus	21.4	35.11
PGSC0003DMT400011537	Potato	mitochondrion, nucleus	27.91	32.09
PGSC0003DMT400010296	Potato	nucleus	28.84	30.54
VIT_03s0063g00460.t01	Wine grape	nucleus	34.88	30.36
PGSC0003DMT400010297	Potato	nucleus	27.44	29.65
Solyc02g090770.1.1	Tomato	nucleus	27.91	29.56
Solyc02g090790.1.1	Tomato	nucleus	30.23	28.63
VIT_01s0150g00120.t01	Wine grape	nucleus, plastid	26.05	23.63
VIT_17s0000g00200.t01	Wine grape	nucleus	25.58	22.36
VIT_07s0005g00820.t01	Wine grape	nucleus	24.65	20.46
VIT_07s0031g01980.t01	Wine grape	nucleus	31.16	19.03
VIT_05s0077g01860.t01	Wine grape	nucleus	22.33	18.53
VIT_14s0068g01040.t01	Wine grape	nucleus	26.98	18.01
VIT_09s0002g00470.t01	Wine grape	nucleus	25.58	14.51
VIT_18s0072g00260.t01	Wine grape	nucleus	30.23	13.74

Protein Annotations

EntrezGene:104879921	MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A5C0S9	EMBL:AM478129	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:CAN81688	ProteinID:CAN81688.1	ProteinID:CCB47073	ProteinID:CCB47073.1	InterPro:DNA-bd_dom_sf
EMBL:FN595233	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0001524A64	ArrayExpress:VIT_07s0031g00720	EnsemblPlantsGene:VIT_07s0031g00720	EnsemblPlants:VIT_07s0031g00720.t01	RefSeq:XP_010652812.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:16889343..16889990

Molecular Weight (calculated)

24218.8 Da

IEP (calculated)

9.478

GRAVY (calculated)

-0.714

Length

215 amino acids

Sequence
(BLAST)

001: MRMFGDGMKI VESTAWPGLN KDVEFAVMVS TLQNVITGNI EPLQNDTFTT HHSNDLTVLA LPDPEKCQEC GFDGCLGCNF FAPPDERGKK RTRKRKYRGV
101: RHRPWGKWAA EIRDPQKAVR LWLGTFDNAE AAARAYDRKA IEFRGIKAKL NFPLSDYTNE TESSNIMGVR VKPTTSDLGE SRKLKSKEKL HDAVDESELS
201: KKKTAVAGEA SRVRE

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.