Factsheet for VIT_07s0031g01980.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64120	Soybean	nucleus	34.66	43.42
KRH53825	Soybean	nucleus	37.78	41.3
GSMUA_Achr6P18020_001	Banana	nucleus	27.27	36.23
Solyc04g051360.2.1	Tomato	nucleus	29.55	34.32
VIT_17s0000g00200.t01	Wine grape	nucleus	23.86	34.15
VIT_01s0150g00120.t01	Wine grape	nucleus, plastid	22.16	32.91
VIT_07s0031g00710.t01	Wine grape	nucleus	16.48	31.18
VIT_07s0031g00720.t01	Wine grape	nucleus	19.03	31.16
PGSC0003DMT400050718	Potato	nucleus	34.38	30.56
KRH43369	Soybean	nucleus	25.57	30.41
AT5G64750.1	Thale cress	nucleus	33.52	30.18
CDY46821	Canola	nucleus	32.67	30.1
Bra031903.1-P	Field mustard	nucleus	32.39	30.08
CDY31304	Canola	nucleus	32.39	29.92
Bra024325.1-P	Field mustard	nucleus	32.95	29.37
CDY08853	Canola	nucleus	32.67	29.11
Bra037794.1-P	Field mustard	nucleus	31.25	28.87
CDY14506	Canola	nucleus	32.1	28.83
VIT_18s0072g00260.t01	Wine grape	nucleus	37.78	28.12
VIT_03s0063g00460.t01	Wine grape	nucleus	19.32	27.53
TraesCS5D01G129400.1	Wheat	nucleus	25.57	27.52
CDX81250	Canola	nucleus	31.25	27.3
HORVU5Hr1G036590.2	Barley	nucleus	24.15	27.07
Zm00001d053195_P002	Maize	nucleus	25.28	27.05
TraesCS5A01G112600.1	Wheat	nucleus	25.0	26.83
OQU82952	Sorghum	mitochondrion	25.0	26.75
TraesCS5B01G118200.1	Wheat	nucleus	25.28	26.1
KRH59504	Soybean	nucleus	25.0	25.51
VIT_14s0068g01040.t01	Wine grape	nucleus	21.88	23.91
VIT_07s0005g00820.t01	Wine grape	nucleus	17.33	23.55
OQU78803	Sorghum	nucleus	22.73	23.46
VIT_05s0077g01860.t01	Wine grape	nucleus	16.19	22.01
Zm00001d023535_P001	Maize	nucleus	25.28	21.04
Os12t0168100-01	Rice	nucleus	18.47	19.06
VIT_09s0002g00470.t01	Wine grape	nucleus	19.6	18.21

Protein Annotations

EntrezGene:100264647	wikigene:100264647	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:AM424485	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:CAN60132	ProteinID:CAN60132.1	ProteinID:CBI21548	ProteinID:CBI21548.3	UniProt:D7SW99
InterPro:DNA-bd_dom_sf	EMBL:FN595233	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EntrezGene:LOC100264647	wikigene:LOC100264647	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF59	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00015C956C
ArrayExpress:VIT_07s0031g01980	EnsemblPlantsGene:VIT_07s0031g01980	EnsemblPlants:VIT_07s0031g01980.t01	unigene:Vvi.17718	RefSeq:XP_002278226	RefSeq:XP_002278226.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:18105404..18106882

Molecular Weight (calculated)

37910.8 Da

IEP (calculated)

7.114

GRAVY (calculated)

-0.577

Length

352 amino acids

Sequence
(BLAST)

001: MCVLKVANAR KSEQRLRVEG VRDDEMDGGA ASGVMFPGHN REREMSAMVT ALTNVVAGHV SDDLVNQTGS DPCCLLGSCS WGAGHKRGRD DQGHVSESVS
101: TISRAFGDLS HGGSSSFRVG EGSVLNTNTT AASESSLMVP TYEYVDTYRG EPRRRYRGVR QRPWGKWAAE IRDPYRAARV WLGTFDSAEA AARAYDEAAL
201: RFRGNKAKLN FPENVQLRPS PSGSQATQLA ISDSPETLFS VPSYTNPIVQ SQPLHRSRSS ELPGDYFNYS QMGSSSSDYF PRQPMNLLDQ MRLASPLQSS
301: SSLSSSSPLG SSVSSASSSP PPFSPFFPPQ PPSAGQSGGA DIPAPPWSDT SQ

Best Arabidopsis Sequence Match ( AT5G64750.1 )
(BLAST)

001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S

Arabidopsis Description

ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.